Job Description P75801 Confidence 100.00% Date Thu Jan 5 12:14:22 GMT 2012 Rank 5 Aligned Residues 150 % Identity 27% Template c3qyyB_ PDB info PDB header:signaling protein/inhibitor Chain: B: PDB Molecule:response regulator; PDBTitle: a novel interaction mode between a microbial ggdef domain and the bis-2 (3, 5 )-cyclic di-gmp Resolution 1.90 Å

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		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.							.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.
Query Sequence		S	M	Y	N	S	A	F	L	D	D	L	T	K	A	M	G	R	K	S	F	D	E	D	L	K	A	L	.	.	.	.	.	.	P	E	K	G	G	Y	L	C	L	F	D	V	D	K	F	K	N	I	N	D	T	F	G	H	L	L	G	D	E	V	L	M	K	V	V	K	I	L	K	S	Q	I	P	V	D	K	G
Query Conservation																													.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.																																												.
Template Conservation																																																																														.
Template Sequence		D	L	K	R	H	A	L	F	D	P	L	T	E	A	L	N	R	R	G	C	E	Q	A	M	R	D	S	V	T	A	A	Q	R	E	G	W	P	F	V	L	F	V	L	D	M	D	N	L	K	P	I	N	D	R	F	G	H	L	A	G	D	R	V	L	V	R	L	V	E	S	A	Y	G	W	L	G	.	A	Q	D
Template Known Secondary structure									B		T	T	T		S	B																			T												S	S																										T	T			.	T	T
Template Predicted Secondary structure																																																																														.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	Y	R	F	G	G	D	E	F	A	V	I	Y	T	G	G	T	L	E	E	L	L	S	I	L	K	E	I	V	H	F	Q	V	G	S	I	N	L	S	T	S	I	G	V	A	H	S	N	E	C	P	T	V	E	R	L	K	M	L	A	D	E	R	L	Y	K	S	K	K	N	G	R	A	Q	I	S	W	Q
Query Conservation
Alig confidence																																							.	.
Template Conservation																																							.	.
Template Sequence		W	I	G	R	W	G	G	D	E	F	L	I	G	V	H	A	S	E	D	E	A	T	L	K	L	N	Q	W	L	S	M	L	E	E	A	P	L	.	.	H	V	S	A	G	S	A	V	C	E	V	G	I	D	A	T	E	L	Y	R	R	A	D	A	A	M	Y	R	A	K	F	S	G	G	R	R	L	V	R	D
Template Known Secondary structure								T	T								S																						.	.											T	T																				T	T	S	S
Template Predicted Secondary structure																																							.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions