 |
Job Description | P75801 | Confidence | 11.99% | Date | Thu Jan 5 12:14:22 GMT 2012 |
Rank | 68 | Aligned Residues | 67 |
% Identity | 19% | Template | c3k30B_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:histamine dehydrogenase; |
PDBTitle: histamine dehydrogenase from nocardiodes simplex
|
Resolution | 2.70 Å |
|
 |
  |   |
336 | . | . | . | 340 | . | . | . | . | |
|
. | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | T | F | G | H | L | L | G | D | . |
. |
E | V | L | M | K | V | V | K | I | L | K | S | Q | I | P | V | D | K | G | K | V | Y | R | F | G | G | D | E | F | A | V | I | Y | T | G | G | T | L | E | E | L | L | S | I | L | K | E | I | V | H | F | Q | V | G | S | I | N | L | S | T | S | I | G |
Query Conservation |   |
|   |
|
|
|   |   |
|
| . | . |   |
|
|   |   |
|
|   |   |
|   |   |   |
|
|   |   |   |
|   |
|   |
|   |
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|   |
|
|
|   |
|
|   |   |
|
|
|   |   |
|
|   |   |   |
|   |
|   |   |
|   |   |
|   |   |   |   |   |   |   | . | . |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |
| . | . | . |   |   |   |   |
|   |   |   |
|
|   |
|
Template Sequence |   |
D | E | Y | G | G | S | L | E | N | R | M | R | L | L | R | E | L | L | E | D | T | L | D | E | C | A | G | R | A | A | V | A | C | R | I | T | V | E | E | E | I | . |
. |
D | G | G | I | T | R | E | D | I | E | G | V | L | R | E | L | . |
. |
. |
G | E | L | P | D | L | W | D | F | A | M | G |
Template Known Secondary structure |   |
S | T | T | S | S | S |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S | S |  |  |  |  |  |  |  | S |
|
|
| S | . | . | T | T | S |
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | T | T | S | S | S |  |  |  |  |  |
| S |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |
|
| . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |
|
|
|
|  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
197 | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | |
|
. | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | |
|
|
. | . | . | . | . | . | 260 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|