Return to main results Retrieve Phyre Job Id

Job DescriptionP75801
Confidence100.00%DateThu Jan 5 12:14:22 GMT 2012
Rank3Aligned Residues196
% Identity26%Templatec3breA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:probable two-component response regulator; PDBTitle: crystal structure of p.aeruginosa pa3702
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   246...250.........260.........270.........280.........290.........300.........310....... ..
Predicted Secondary structure 




......

Query SS confidence 







































































. . . . . .

Query Sequence  SCLYLVRRVINRGIVEKEAIINNHFERVLDGGLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALP. . . . . . EK
Query Conservation                                               
   
  
 



 


 
   
    ......  
Alig confidence 







































































......

Template Conservation 

     
                                            
  
 
 
       
   
        
Template Sequence  KLPDAIELVARIRYHSRSYIALQQRDEAYRALRESQQQLLETNLVLQRLMNSDGLTGLSNRRHFDEYLEMEWRRSLREQS
Template Known Secondary structure  S


B
TTT
SB
T
Template Predicted Secondary structure 



































































Template SS confidence 















































































   122.......130.........140.........150.........160.........170.........180.........190.........200.
 
   320.........330.........340.........350.........360.........370.........380.........390....
Predicted Secondary structure 






















.....
Query SS confidence 










































































. . . . .
Query Sequence  GGYLCLFDVDKFKNINDTFGHLLGDEVLMKVVKILKSQIPVDKGKVYRFGGDEFAVIYTGGTLEELLSILKEIVH. . . . .
Query Conservation    


 



 

 


 


  

 

  

  
   

   
 
 
 








                 .....
Alig confidence 










































































.....
Template Conservation     
  



 
  


  
    
 

  

  
          
 
  



 


       
  


 
   
   
Template Sequence  QLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCSRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESL
Template Known Secondary structure 
TT
TT

STT
TTT

TT
Template Predicted Secondary structure 























Template SS confidence 















































































   202.......210.........220.........230.........240.........250.........260.........270.........280.
 
   395....400......... 410 .........420.........430.........440.
Predicted Secondary structure  .....




...










Query SS confidence  . . . . .














.
. .






























Query Sequence  . . . . . FQVGSINLSTSIGVA. H. . SNECPTVERLKMLADERLYKSKKNGRAQISW
Query Conservation  .....       

 




. ..         

  

 


 

  


 
  
Alig confidence  .....














.
..






























Template Conservation              

 




             

  
  

  

  
 
    
Template Sequence  QISHDQPRPGSHLTVSIGVSTLVPGGGGQTFRVLIEMADQALYQAKNNGRNQVGL
Template Known Secondary structure 

SSSSTT




SSS

TTTTSSS
Template Predicted Secondary structure 



















Template SS confidence 






















































   282.......290.........300.........310.........320.........330......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions