Job Description P75801 Confidence 61.98% Date Thu Jan 5 12:14:22 GMT 2012 Rank 44 Aligned Residues 62 % Identity 21% Template c2oh2B_ PDB info PDB header:transferase/dna Chain: B: PDB Molecule:dna polymerase kappa; PDBTitle: ternary complex of human dna polymerase Resolution 3.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.																						.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	V	V	K	I	L	K	S	Q	I	P	V	D	K	G	K	V	Y	R	F	G	G	D	E	F	A	V	I	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	G	T	L	E	E	L	L	S	I	L	K	E	I	V	H	F	Q	V	G	S	I	N	L	S	T	S	I
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	V	S	K	E	V	K	E	I	L	A	D	Y	D	P	N	F	M	A	M	S	L	D	E	A	Y	L	N	I	T	K	H	L	E	E	R	Q	N	W	P	E	D	K	R	R	Y	F	I	K	N	S	V	V	F	G	T	S	A	Q	E	V	V	K	E	I	R	F	R	I	E	Q	K	T	T	L	T	A	S	A
Template Known Secondary structure																	T	T			B		S	S	S						T								T	S			T	T	T	S	B								B			S	S																	S
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		407	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		312	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions