Return to main results Retrieve Phyre Job Id

Job DescriptionP0A937
Confidence12.82%DateThu Jan 5 11:09:18 GMT 2012
Rank26Aligned Residues36
% Identity19%Templatec2zkrp_
PDB info PDB header:ribosomal protein/rnaChain: P: PDB Molecule:rna expansion segment es31 part i; PDBTitle: structure of a mammalian ribosomal 60s subunit within an2 80s complex obtained by docking homology models of the rna3 and proteins into an 8.7 a cryo-em map
Resolution8.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40.........50.........
Predicted Secondary structure 























Query SS confidence 














































Query Sequence  LLMLTAGCSTLERVVYRPDINQGNYLTANDVSKIRVGMTQQQVAYAL
Query Conservation      




      
  

 

  
    
  
  



 

  

Alig confidence 








...........


























Template Conservation 


 

  
...........
 





 
   
  
 

  

 

Template Sequence  LASSVLRCG. . . . . . . . . . . KKKVWLDPNETNEIANANSRQQIRKLI
Template Known Secondary structure  TS
...........GGG
STT

S
Template Predicted Secondary structure 


...........





Template SS confidence 














































   10........ .20.........30.........40.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions