Job Description P52599 Confidence 28.22% Date Thu Jan 5 12:05:49 GMT 2012 Rank 141 Aligned Residues 138 % Identity 17% Template c3mmpC_ PDB info PDB header:transferase Chain: C: PDB Molecule:elongation factor tu 2, elongation factor ts; PDBTitle: structure of the qb replicase, an rna-dependent rna polymerase2 consisting of viral and host proteins Resolution 2.50 Å

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		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.				.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.
Query SS confidence																																									.	.	.
Query Sequence		D	I	K	S	P	V	T	G	Y	I	A	Q	R	S	V	Q	V	G	E	T	V	S	P	G	Q	S	L	M	A	V	V	P	A	R	Q	M	W	V	N	.	.	.	A	N	F	K	E	T	Q	L	T	D	V	R	I	G	Q	S	V	N	I	I	S	D	L	Y	G	E	N	V	V	F	H	G	R	V	T	G	I	N
Query Conservation																																									.	.	.
Alig confidence																					.																				.	.	.																																					.
Template Conservation																					.																																																											.
Template Sequence		V	F	S	I	S	G	R	G	T	V	V	T	G	R	V	E	R	G	I	.	I	K	V	G	E	E	V	E	I	V	G	I	K	E	T	Q	K	S	T	C	T	G	V	E	M	F	R	K	L	L	D	E	G	R	A	G	E	N	V	G	V	L	L	R	G	I	K	R	E	E	I	E	R	G	Q	V	L	A	.	K
Template Known Secondary structure						T	T	T										B	S		.			T	T							S	S	S													S	S				S				T	T								S	S			G	G	G			T	T					.
Template Predicted Secondary structure																					.																																																											.
Template SS confidence
		1217	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.		.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.		.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.			.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.		.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure																																									.	.																							.
Query SS confidence																																									.	.																							.
Query Sequence		M	G	T	G	N	A	F	S	L	L	P	A	Q	N	A	T	G	N	W	I	K	I	V	Q	R	V	P	V	E	V	S	L	D	P	K	E	L	M	E	.	.	H	P	L	R	I	G	L	S	M	T	A	T	I	D	T	K	N	E	D	I	A	E	.	M	P	E	L	A	S	T	V	T	S	M	P	A	Y	T	S
Query Conservation																																									.	.																							.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.																							.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	G	T	I	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	H	T	K	F	E	S	E	V	Y	I	L	S	K	D	E	G	G	R	H	T	P	F	F	K	G	Y	R	P	Q	F	Y	F	R	T	T	D	V	T	G	T	I	E	L	P	E	G	V	E	M	V	M	P	G	D	N	I	K	M
Template Known Secondary structure		T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T	T	T	S		S	S		B		T	T								T	T											T	T				B		T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1295	.	.	.	.																	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.
		364	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1359	1360

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions