Job Description P52599 Confidence 35.08% Date Thu Jan 5 12:05:49 GMT 2012 Rank 130 Aligned Residues 113 % Identity 16% Template c3izq1_ PDB info PDB header:ribosomal protein,hydrolase Chain: 1: PDB Molecule:elongation factor 1 alpha-like protein; PDBTitle: structure of the dom34-hbs1-gdpnp complex bound to a translating2 ribosome Resolution 9.50 Å

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		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250										.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.
Query Sequence		P	V	T	G	Y	I	A	Q	R	S	V	Q	V	G	E	T	V	S	P	G	Q	S	L	M	A	V	V	P	A	R	Q	M	W	V	N	A	N	.	.	.	.	.	.	.	.	.	F	K	E	T	Q	L	T	D	V	R	I	G	Q	S	V	N	I	I	S	D	L	Y	G	E	N	V	V	F	H	G	R	V	T	G
Query Conservation																																							.	.	.	.	.	.	.	.	.
Alig confidence																	.																						.	.	.	.	.	.	.	.	.
Template Conservation																	.
Template Sequence		S	N	D	L	A	L	V	S	G	K	L	E	S	G	S	.	I	Q	P	G	E	S	L	T	I	Y	P	S	E	Q	S	C	I	V	D	K	I	Q	V	G	S	Q	Q	G	Q	S	T	N	H	E	E	T	D	V	A	I	K	G	D	F	V	T	L	K	L	R	K	A	Y	P	E	D	I	Q	N	G	D	L	A	A
Template Known Secondary structure			S	S	S	S									S		.			T	T						T	T	T	T											S	S			S		S	S	S									T	T								S	S			T	T	S			T	T				B
Template Predicted Secondary structure																	.
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	M	G	T	G	N	A	F	S	L	L	P	A	Q	N	A	T	G	N	W	I	K	I	V	Q	R	V	P	V	E	V	S	L	D	P	K	E	L	M	E	H	P	L	R	I	G	L	S	M	T	A	T	I	D	T	K	N	E	D	I
Query Conservation
Alig confidence		.							.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation		.							.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Sequence		.	S	V	D	Y	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	H	S	A	Q	C	F	V	L	E	L	T	T	F	D	M	N	.	.	.	R	P	L	L	P	G	T	P	F	I	L	F	I	G	V	K	E	Q	P	A
Template Known Secondary structure		.		S	T	T		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.				B	S										S		S	.	.	.	S		B		T	T							S	S	S
Template Predicted Secondary structure		.							.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template SS confidence
			494	.	.	.	.	.															500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.				.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions