Return to main results Retrieve Phyre Job Id

Job DescriptionP52599
Confidence90.30%DateThu Jan 5 12:05:49 GMT 2012
Rank40Aligned Residues33
% Identity24%Templatec1otpA_
PDB info PDB header:phosphorylaseChain: A: PDB Molecule:thymidine phosphorylase; PDBTitle: structural and theoretical studies suggest domain movement produces an2 active conformation of thymidine phosphorylase
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   53......60........ .70.........80.....
Predicted Secondary structure 




...............................







Query SS confidence 















. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
















Query Sequence  NADPISAQVSGSVTVV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . NHKDTNYVRQGDILVSL
Query Conservation      
 
   
 
  
............................... 
  
  



  
  
Alig confidence 















...............................
















Template Conservation        
   
 
  
            



    
  
   

      
  
  
  
  
Template Sequence  LTKAVYADTEGFVSEMDTRALGMAVVAMGGGRRQASDTIDYSVGFTDMARLGDQVDGQRPLAVI
Template Known Secondary structure 
SS

TTS
SSSSS


SS
S


TT

TTS
Template Predicted Secondary structure 































Template SS confidence 































































   339340.........350.........360.........370.........380.........390.........400..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions