Job Description P0AFR2 Confidence 99.66% Date Thu Jan 5 11:27:02 GMT 2012 Rank 7 Aligned Residues 105 % Identity 26% Template d1auza_ SCOP info SpoIIaa-like SpoIIaa-like Anti-sigma factor antagonist SpoIIaa Resolution UNK

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		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.			.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.		.	.	.	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.																														.
Query SS confidence																																					.	.																														.
Query Sequence		V	V	D	V	P	D	D	V	L	V	L	R	V	I	G	P	L	F	F	A	A	A	E	G	L	F	T	D	L	E	S	R	L	E	G	.	.	K	R	I	V	I	L	K	W	D	A	V	P	V	L	D	A	G	G	L	D	A	F	Q	R	F	V	K	R	L	.	P	E	G	C	E	L	R	V	C	N	V	E	F
Query Conservation																																					.	.																														.
Alig confidence																																					.	.																														.
Template Conservation
Template Sequence		D	M	N	V	K	E	S	V	L	C	I	R	L	T	G	E	L	D	H	H	T	A	E	T	L	K	Q	K	V	T	Q	S	L	E	K	D	D	I	R	H	I	V	L	N	L	E	D	L	S	F	M	D	S	S	G	L	G	V	I	L	G	R	Y	K	Q	I	K	Q	I	G	G	E	M	V	V	C	A	I	S	P
Template Known Secondary structure							T	T							B	B			S	T	T																S	S									S	B		S				T	T																T	S									T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		529	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	L	R	T	M	A	R	A	G	I	Q	P	I	P	G	R	L	A	F	F	P	N	R	R	A	A	M	A	D	L
Query Conservation
Alig confidence																	.	.	.
Template Conservation																	.	.	.
Template Sequence		A	V	K	R	L	F	D	M	S	G	L	F	K	I	I	.	.	.	R	F	E	Q	S	E	Q	Q	A	L	L	T	L
Template Known Secondary structure		T	T	T							S		G	G	G	T	.	.	.		B			S	G	G	G	T	G	G	G	T
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions