Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFR2
Confidence99.91%DateThu Jan 5 11:27:02 GMT 2012
Rank2Aligned Residues117
% Identity98%Templatec3ny7A_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:sulfate transporter; PDBTitle: stas domain of ychm bound to acp
Resolution1.92 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   443......450.........460.........470.........480.........490.........500.........510.........520..
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  ARMTRLAPVVVDVPDDVLVLRVIGPLFFAAAEGLFTDLESRLEGKRIVILKWDAVPVLDAGGLDAFQRFVKRLPEGCELR
Query Conservation                  
 
    
 
 
 
       
         



   
  

 

   
  
           
Alig confidence 















































































Template Conservation                  
 
    
 
 
  
      
         



   
  

 

   
  
      
  
 
Template Sequence  SHMTRLAPVVVDVPDDVLVLRVIGPLFFAAAEGLFTDLESRLEGKRIVILKWDAVPVLDAGGLDAFQRFVKRLPEGCELR
Template Known Secondary structure 


S





TTS
B
TT
TT
S


B


TT
Template Predicted Secondary structure 































Template SS confidence 















































































   434.....440.........450.........460.........470.........480.........490.........500.........510...
 
   523......530.........540.........550.........
Predicted Secondary structure 
















Query SS confidence 




































Query Sequence  VCNVEFQPLRTMARAGIQPIPGRLAFFPNRRAAMADL
Query Conservation             
   
          
     
    
Alig confidence 




































Template Conservation 
      
   
   
    
    

 
   

  
Template Sequence  VCNVEFQPLRTMARAGIQPIPGRLAFFPNRRAAMADL
Template Known Secondary structure 


TT


BTTTSSTTT
Template Predicted Secondary structure 












Template SS confidence 




































   514.....520.........530.........540.........550
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions