Job Description P0AFR2 Confidence 28.18% Date Thu Jan 5 11:27:02 GMT 2012 Rank 55 Aligned Residues 84 % Identity 11% Template c3nhzA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:two component system transcriptional regulator mtra; PDBTitle: structure of n-terminal domain of mtra Resolution 2.50 Å

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		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	A	A	E	G	L	F	T	D	L	E	S	R	L	E	G	K	R	I	V	I	L	K	W	D	A	V	P	V	L	D	A	G	G	L	D	A	F	Q	R	F	V	K	R	L	P	E	G	C	E	L	R	V	C	N	V	E	F	Q	P	L	R	T	M	A	R	A	G	I	Q	P	I	P	G	R	L	A	F	F
Query Conservation
Alig confidence																.	.													.	.	.
Template Conservation																.	.													.	.	.
Template Sequence		I	G	D	G	T	Q	A	L	T	A	V	R	E	L	.	.	R	P	D	L	V	L	L	D	L	M	L	P	.	.	.	G	M	N	G	I	D	V	C	R	V	L	R	A	D	S	G	V	P	I	V	M	L	T	A	K	T	D	T	V	D	V	V	L	G	L	E	S	G	A	D	D	Y	I	M	K	P	F	K	P
Template Known Secondary structure					G	G	G									.	.			S						S	S		S	.	.	.	S	S																							T	T		S	S								T	T								S
Template Predicted Secondary structure																.	.													.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60				.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		550	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	R	R	A	A	M	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	L	V	A	R	V	R	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions