Job Description P0AFR2 Confidence 99.64% Date Thu Jan 5 11:27:02 GMT 2012 Rank 9 Aligned Residues 104 % Identity 16% Template c3f43A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative anti-sigma factor antagonist tm1081; PDBTitle: crystal structure of a putative anti-sigma factor antagonist (tm1081)2 from thermotoga maritima at 1.59 a resolution Resolution 1.59 Å

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		453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.			.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.		.	.	.	.	520	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.																																.
Query SS confidence																																		.	.																																.
Query Sequence		V	D	V	P	D	D	V	L	V	L	R	V	I	G	P	L	F	F	A	A	A	E	G	L	F	T	D	L	E	S	R	L	.	.	E	G	K	R	I	V	I	L	K	W	D	A	V	P	V	L	D	A	G	G	L	D	A	F	Q	R	F	V	K	R	L	.	P	E	G	C	E	L	R	V	C	N	V	E	F	Q
Query Conservation																																		.	.																																.
Alig confidence																																		.	.																																.
Template Conservation
Template Sequence		Y	K	I	V	D	D	V	V	I	L	X	P	N	K	E	L	N	I	E	N	A	H	L	F	K	K	W	V	F	D	E	F	L	N	K	G	Y	N	K	I	F	L	V	L	S	D	V	E	S	I	D	S	F	S	L	G	V	I	V	N	I	L	K	S	I	S	S	S	G	G	F	F	A	L	V	S	P	N	E	K
Template Known Secondary structure						T	T								S			S	T	T	T												T	G	G	G	T									T	T																							T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	R	T	M	A	R	A	G	I	Q	P	I	P	G	R	L	A	F	F	P	N	R	R	A	A	M	A	D	L
Query Conservation
Alig confidence																.	.	.
Template Conservation																.	.	.
Template Sequence		V	E	R	V	L	S	L	T	N	L	D	R	I	V	.	.	.	K	I	Y	D	T	I	S	E	A	X	E	E	V
Template Known Secondary structure									T	T	G	G	G	T	S	.	.	.				S	S
Template Predicted Secondary structure																.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.				.	.	100	.	.	.	.	.	.	.	.	.	110

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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