Job Description P0AFR2 Confidence 42.95% Date Thu Jan 5 11:27:02 GMT 2012 Rank 33 Aligned Residues 85 % Identity 11% Template c2zwmA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulatory protein yycf; PDBTitle: crystal structure of yycf receiver domain from bacillus2 subtilis Resolution 2.04 Å

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		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	A	A	E	G	L	F	T	D	L	E	S	R	L	E	G	K	R	I	V	I	L	K	W	D	A	V	P	V	L	D	A	G	G	L	D	A	F	Q	R	F	V	K	R	L	P	E	G	C	E	L	R	V	C	N	V	E	F	Q	P	L	R	T	M	A	R	A	G	I	Q	P	I	P	G	R	L	A	F	F
Query Conservation
Alig confidence																.	.										.							.	.
Template Conservation																.	.										.							.	.
Template Sequence		A	H	D	G	N	E	A	V	E	M	V	E	E	L	.	.	Q	P	D	L	I	L	L	D	I	.	M	L	P	N	K	D	.	.	G	V	E	V	C	R	E	V	R	K	K	Y	D	M	P	I	I	M	L	T	A	K	D	S	E	I	D	K	V	I	G	L	E	I	G	A	D	D	Y	V	T	K	P	F	S	T
Template Known Secondary structure				S												.	.			S						T	.	T		S	S	S		.	.														S								T	T											T	T								S
Template Predicted Secondary structure																.	.										.							.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.		.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		550	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	R	R	A	A	M	A	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E	L	L	A	R	V	K	A	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions