 |
Job Description | P0AFR2 | Confidence | 32.65% | Date | Thu Jan 5 11:27:02 GMT 2012 |
Rank | 47 | Aligned Residues | 86 |
% Identity | 14% | Template | c2q3eH_ |
PDB info |
PDB header:oxidoreductase | Chain: H: PDB Molecule:udp-glucose 6-dehydrogenase; |
PDBTitle: structure of human udp-glucose dehydrogenase complexed with nadh and2 udp-glucose
|
Resolution | 2.00 Å |
|
 |
  |   |
473 | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | |
. | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | E | G | L | F | T | D | L | E | S | R | L | E | G | K | R | I | V | I | L | K | W | D | A | V | P | V | L | D | A | G | G | L | D | A | F | Q | R | F | V | K | R | L | . |
P | E | G | C | E | L | R | V | C | N | V | E | F | Q | P | L | R | T | M | A | R | A | G | I | Q | P | I | P | G | R | L | A | F | F | P | N |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |
|   |   |
|
|   |
|
|   |   |   |
|   |   |
|   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|   |   |
|   |
|   |
|   |
|
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
A | S | R | I | I | D | S | L | F | N | T | V | T | D | K | K | I | A | I | L | G | F | A | F | K | K | D | T | G | D | T | R | E | S | S | S | I | Y | I | S | K | Y | L | M | D | E | G | A | H | L | H | I | Y | D | P | K | V | P | R | E | Q | I | V | V | D | L | S | H | D | Q | V | S | R | L | V | T | I | S | K | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T | T |
|
| T | T |
|  |  |  |  |  |
|
| S | S | S | S | S |
|
|
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
| S | S | S |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
| S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
315 | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . |
  |
  |   |
552 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
Query Sequence |   |
R | R | A | A | M | A | D |
Query Conservation |   |
  |   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |
Template Sequence |   |
P | Y | E | A | C | D | G |
Template Known Secondary structure |   |
 |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
  |   |
401 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|