Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8M6
Confidence4.73%DateThu Jan 5 11:08:12 GMT 2012
Rank77Aligned Residues31
% Identity23%Templated1t6sa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain ScpB/YpuH-like
Resolution1.95

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   45....50.........60.........70.....
Predicted Secondary structure 




Query SS confidence 






























Query Sequence  LDNLSDYIKPGMSVEAIQGIIASMKGDYEDR
Query Conservation 



  



 

 
 
 












Alig confidence 






























Template Conservation     
   
        
   
  
   
   
Template Sequence  LQTLSQITAHKFTPSELQEAVDELNRDYEAT
Template Known Secondary structure  TT



Template Predicted Secondary structure 






Template SS confidence 






























   25....30.........40.........50.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions