Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8M6
Confidence10.79%DateThu Jan 5 11:08:12 GMT 2012
Rank20Aligned Residues55
% Identity18%Templatec3mejA_
PDB info PDB header:transcriptional regulatorChain: A: PDB Molecule:transcriptional regulator ywtf; PDBTitle: crystal structure of putative transcriptional regulator ywtf from2 bacillus subtilis, northeast structural genomics consortium target3 sr736
Resolution2.49 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910....... ..20.........30.........40.........50.........60.........70
Predicted Secondary structure  ....




Query SS confidence 








. . . .




















































Query Sequence  QDVLEFVRL. . . . FRRKNKLQREIQDVEKKIRDNQKRVLLLDNLSDYIKPGMSVEAIQGIIASMKG
Query Conservation 




 

 .... 









 


















  



 

 
 
 







Alig confidence 








....



















.......

























Template Conservation    

 
 
 
 

  
  

  

 

  
   .......       
 



      
      
Template Sequence  EEALAYVRTRKSDLLRGQRQXEVLSAIIDKSKS. . . . . . . LDTXGQNLKXNLSLKDAIGLFPFITS
Template Known Secondary structure 





S
.......





S
SS
TT
Template Predicted Secondary structure 




.......











Template SS confidence 

































































   210.........220.........230.........240.. .......250.........260........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions