 |
Job Description | P0A8M6 | Confidence | 3.86% | Date | Thu Jan 5 11:08:12 GMT 2012 |
Rank | 96 | Aligned Residues | 36 |
% Identity | 36% | Template | c3l0iA_ |
PDB info |
PDB header:protein binding/protein transport | Chain: A: PDB Molecule:drra; |
PDBTitle: complex structure of sidm/drra with the wild type rab1
|
Resolution | 2.85 Å |
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | E | F | V | R | L | F | R | R | K | N | K | L | Q | R | E | I | Q | D | V | E | K | K | I | R | D | N | Q | K | R | V | L | L | L | D | N | L | S | D | Y | I | K |
Query Conservation |   |
|
|   |
|
|   |   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
L | G | V | Q | R | V | T | R | I | E | N | . |
. |
. |
. |
. |
. |
L | E | N | A | K | K | L | W | D | N | A | N | S | X | L | E | K | G | N | I | S | G | Y | L | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
335 | . | . | . | . | 340 | . | . | . | . | . | |
|
|
|
|
|
. | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|