Job Description P0A8M6 Confidence 12.40% Date Thu Jan 5 11:08:12 GMT 2012 Rank 13 Aligned Residues 59 % Identity 8% Template c2vz4A_ PDB info PDB header:transcription Chain: A: PDB Molecule:hth-type transcriptional activator tipa; PDBTitle: the n-terminal domain of merr-like protein tipal bound to2 promoter dna Resolution 2.90 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Q	K	R	V	L	L	L	D	N	L	S	D	Y	I	K	P	G	M	S	V	E	A	I	Q	G	I	I	A	S	M	K	G	D	Y	E	D	R	V	D	D	Y	I	I	K	N	A	E	L	S	K	E	R	R	D	I	S	K	K	L
Query Conservation
Alig confidence																														.
Template Conservation																														.
Template Sequence		S	D	A	D	L	D	R	L	Q	Q	I	L	F	Y	R	E	L	G	F	P	L	D	E	V	A	A	L	L	.	D	D	R	A	H	L	R	R	Q	H	E	L	L	S	A	R	I	G	K	L	Q	K	M	A	A	A	V	E	Q	A	M
Template Known Secondary structure																		T	T											.	T
Template Predicted Secondary structure																														.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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