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Job DescriptionP45472
Confidence89.94%DateThu Jan 5 12:02:48 GMT 2012
Rank6Aligned Residues62
% Identity6%Templatec2wshC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:endonuclease ii; PDBTitle: structure of bacteriophage t4 endoii e118a mutant
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10..... ....20.........30.........40. ........50... ......60.....
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Query Sequence  LYLIRTADNK. LYTGITTDVERRYQQHQSGKGAKALR. . . . . . . . . GKGELTLVFSAP. . . . . . . . . . VGDRSLALRAEY
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Template Sequence  VIYAIAINDELVYIGKTKNLRKRINYYRTAINRDSTKSALIHSALKEGSKVEFYARQCFNLSXTNELGTXTIATIDLEAP
Template Known Secondary structure  TTS
GGG


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   35....40.........50.........60.........70.........80.........90.........100.........110....
 
   66.
Predicted Secondary structure 
Query SS confidence 

Query Sequence  RV
Query Conservation   
Alig confidence 

Template Conservation   
Template Sequence  LF
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   120.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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