Email l.a.kelley@imperial.ac.uk Description Q2M7R5 Date Thu Jan 5 12:34:01 GMT 2012 Unique Job ID db2a286ae0244ecb

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2ae9a1 82.0 26 Fold:DNA polymerase III theta subunit-like Superfamily:DNA polymerase III theta subunit-like Family:DNA polymerase III theta subunit-like 2 d2idob1 79.6 28 Fold:DNA polymerase III theta subunit-like Superfamily:DNA polymerase III theta subunit-like Family:DNA polymerase III theta subunit-like 3 d1se7a_ 79.0 28 Fold:DNA polymerase III theta subunit-like Superfamily:DNA polymerase III theta subunit-like Family:DNA polymerase III theta subunit-like 4 d2eyqa6 52.5 39 Fold:TRCF domain-like Superfamily:TRCF domain-like Family:TRCF domain 5 c2qsrA_ 44.3 22 PDB header:transcription Chain: A: PDB Molecule:transcription-repair coupling factor; PDBTitle: crystal structure of c-terminal domain of transcription-repair2 coupling factor 6 c1zxhA_ 18.3 44 PDB header:immune system/protein binding Chain: A: PDB Molecule:immunoglobulin g binding protein g; PDBTitle: g311 mutant protein 7 d1mvka_ 17.5 14 Fold:beta-Grasp (ubiquitin-like) Superfamily:Immunoglobulin-binding domains Family:Immunoglobulin-binding domains 8 c1urqA_ 17.4 18 PDB header:transport protein Chain: A: PDB Molecule:m-tomosyn isoform; PDBTitle: crystal structure of neuronal q-snares in complex with2 r-snare motif of tomosyn 9 d1em7a_ 17.3 44 Fold:beta-Grasp (ubiquitin-like) Superfamily:Immunoglobulin-binding domains Family:Immunoglobulin-binding domains 10 c3gxqB_ 16.3 67 PDB header:dna binding protein/dna Chain: B: PDB Molecule:putative regulator of transfer genes arta; PDBTitle: structure of arta and dna complex 11 d1x9fc_ 16.0 15 Fold:Globin-like Superfamily:Globin-like Family:Globins 12 d1x9fa_ 15.2 9 Fold:Globin-like Superfamily:Globin-like Family:Globins 13 c1gl2A_ 13.7 36 PDB header:membrane protein Chain: A: PDB Molecule:endobrevin; PDBTitle: crystal structure of an endosomal snare core complex 14 c2eyqA_ 13.5 39 PDB header:hydrolase Chain: A: PDB Molecule:transcription-repair coupling factor; PDBTitle: crystal structure of escherichia coli transcription-repair2 coupling factor 15 c1k6mA_ 12.4 29 PDB header:transferase, hydrolase Chain: A: PDB Molecule:6-phosphofructo-2-kinase/fructose-2,6- PDBTitle: crystal structure of human liver 6-phosphofructo-2-2 kinase/fructose-2,6-bisphosphatase 16 d2ieaa1 12.2 24 Fold:Thiamin diphosphate-binding fold (THDP-binding) Superfamily:Thiamin diphosphate-binding fold (THDP-binding) Family:TK-like Pyr module 17 d1q3ma_ 11.2 67 Fold:GLA-domain Superfamily:GLA-domain Family:GLA-domain 18 c2i1vB_ 11.2 24 PDB header:transferase, hydrolase Chain: B: PDB Molecule:6-phosphofructo-2-kinase/fructose-2,6- PDBTitle: crystal structure of pfkfb3 in complex with adp and2 fructose-2,6-bisphosphate 19 c3qf7D_ 10.5 86 PDB header:hydrolase Chain: D: PDB Molecule:mre11; PDBTitle: the mre11:rad50 complex forms an atp dependent molecular clamp in dna2 double-strand break repair 20 c1bifA_ 9.6 29 PDB header:bifunctional enzyme Chain: A: PDB Molecule:6-phosphofructo-2-kinase/ fructose-2,6-bisphosphatase; PDBTitle: 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase bifunctional2 enzyme complexed with atp-g-s and phosphate 21 d1p7ea_ not modelled 9.5 39 Fold:beta-Grasp (ubiquitin-like) Superfamily:Immunoglobulin-binding domains Family:Immunoglobulin-binding domains 22 d1pgaa_ not modelled 9.4 28 Fold:beta-Grasp (ubiquitin-like) Superfamily:Immunoglobulin-binding domains Family:Immunoglobulin-binding domains 23 d2es9a1 not modelled 9.4 63 Fold:YoaC-like Superfamily:YoaC-like Family:YoaC-like 24 c1bm4A_ not modelled 9.3 43 PDB header:viral protein Chain: A: PDB Molecule:protein (moloney murine leukemia virus capsid); PDBTitle: momlv capsid protein major homology region peptide analog 25 d3nlaa_ not modelled 9.3 60 Fold:beta-clip Superfamily:AFP III-like domain Family:AFP III-like domain 26 c3b5nE_ not modelled 9.1 29 PDB header:membrane protein Chain: E: PDB Molecule:synaptobrevin homolog 1; PDBTitle: structure of the yeast plasma membrane snare complex 27 c2zs0A_ not modelled 9.0 7 PDB header:oxygen storage, oxygen transport Chain: A: PDB Molecule:extracellular giant hemoglobin major globin subunit a1; PDBTitle: structural basis for the heterotropic and homotropic interactions of2 invertebrate giant hemoglobin 28 c1yhuW_ not modelled 8.9 15 PDB header:oxygen storage/transport Chain: W: PDB Molecule:hemoglobin b1a chain; PDBTitle: crystal structure of riftia pachyptila c1 hemoglobin reveals novel2 assembly of 24 subunits. 29 c1f02T_ not modelled 8.5 100 PDB header:cell adhesion Chain: T: PDB Molecule:translocated intimin receptor; PDBTitle: crystal structure of c-terminal 282-residue fragment of2 intimin in complex with translocated intimin receptor3 (tir) intimin-binding domain 30 c3hg9B_ not modelled 8.3 45 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:pilm; PDBTitle: crystal structure of putative pilm protein from pseudomonas aeruginosa2 2192 31 d1opsa_ not modelled 8.3 40 Fold:beta-clip Superfamily:AFP III-like domain Family:AFP III-like domain 32 c3kyqA_ not modelled 8.3 29 PDB header:transferase Chain: A: PDB Molecule:synaptobrevin homolog ykt6; PDBTitle: lipid-induced conformational switch controls fusion activity of longin2 domain snare ykt6 33 c2bn5A_ not modelled 8.2 35 PDB header:nuclear protein Chain: A: PDB Molecule:psi; PDBTitle: p-element somatic inhibitor protein complex with u1-70k2 proline-rich peptide 34 d1pgxa_ not modelled 8.0 39 Fold:beta-Grasp (ubiquitin-like) Superfamily:Immunoglobulin-binding domains Family:Immunoglobulin-binding domains 35 d1c8aa2 not modelled 8.0 50 Fold:beta-clip Superfamily:AFP III-like domain Family:AFP III-like domain 36 d2dy1a3 not modelled 7.8 31 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:Translational machinery components 37 c2d2mC_ not modelled 7.7 13 PDB header:oxygen storage/transport Chain: C: PDB Molecule:giant hemoglobin, b2(c) globin chain; PDBTitle: structure of an extracellular giant hemoglobin of the2 gutless beard worm oligobrachia mashikoi 38 c1n7sA_ not modelled 7.6 25 PDB header:transport protein Chain: A: PDB Molecule:vesicle-associated membrane protein 2; PDBTitle: high resolution structure of a truncated neuronal snare2 complex 39 c1wvoA_ not modelled 7.5 40 PDB header:transferase Chain: A: PDB Molecule:sialic acid synthase; PDBTitle: solution structure of rsgi ruh-029, an antifreeze protein2 like domain in human n-acetylneuraminic acid phosphate3 synthase gene. 40 d1fcla_ not modelled 7.4 22 Fold:beta-Grasp (ubiquitin-like) Superfamily:Immunoglobulin-binding domains Family:Immunoglobulin-binding domains 41 c2ckcA_ not modelled 7.2 29 PDB header:hydrolase Chain: A: PDB Molecule:chromodomain-helicase-dna-binding protein 7; PDBTitle: solution structures of the brk domains of the human chromo2 helicase domain 7 and 8, reveals structural similarity3 with gyf domain suggesting a role in protein interaction 42 d2ckca1 not modelled 7.2 29 Fold:GYF/BRK domain-like Superfamily:BRK domain-like Family:BRK domain-like 43 d1qkza_ not modelled 7.0 33 Fold:beta-Grasp (ubiquitin-like) Superfamily:Immunoglobulin-binding domains Family:Immunoglobulin-binding domains 44 c3hd7A_ not modelled 7.0 25 PDB header:exocytosis Chain: A: PDB Molecule:vesicle-associated membrane protein 2; PDBTitle: helical extension of the neuronal snare complex into the membrane,2 spacegroup c 1 2 1 45 d1irqa_ not modelled 6.8 50 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:Omega transcriptional repressor 46 d1fd6a_ not modelled 6.8 28 Fold:beta-Grasp (ubiquitin-like) Superfamily:Immunoglobulin-binding domains Family:Immunoglobulin-binding domains 47 c3e0dA_ not modelled 6.7 13 PDB header:transferase/dna Chain: A: PDB Molecule:dna polymerase iii subunit alpha; PDBTitle: insights into the replisome from the crystral structure of2 the ternary complex of the eubacterial dna polymerase iii3 alpha-subunit 48 c1irqB_ not modelled 6.5 50 PDB header:gene regulation Chain: B: PDB Molecule:omega transcriptional repressor; PDBTitle: crystal structure of omega transcriptional repressor at2 1.5a resolution 49 d1gb4a_ not modelled 6.3 28 Fold:beta-Grasp (ubiquitin-like) Superfamily:Immunoglobulin-binding domains Family:Immunoglobulin-binding domains 50 d2qfka1 not modelled 6.1 15 Fold:Globin-like Superfamily:Globin-like Family:Globins 51 d1mi0a_ not modelled 5.9 28 Fold:beta-Grasp (ubiquitin-like) Superfamily:Immunoglobulin-binding domains Family:Immunoglobulin-binding domains 52 d1urva_ not modelled 5.9 6 Fold:Globin-like Superfamily:Globin-like Family:Globins 53 c1ut0A_ not modelled 5.9 6 PDB header:oxygen transport Chain: A: PDB Molecule:cytoglobin; PDBTitle: crystal structure of cytoglobin: the fourth globin type2 discovered in man displays heme hexa-coordination 54 c2ebzA_ not modelled 5.8 22 PDB header:signaling protein Chain: A: PDB Molecule:regulator of g-protein signaling 12; PDBTitle: solution structure of the rgs domain from human regulator2 of g-protein signaling 12 (rgs12) 55 d1mhxa_ not modelled 5.8 28 Fold:beta-Grasp (ubiquitin-like) Superfamily:Immunoglobulin-binding domains Family:Immunoglobulin-binding domains 56 c1c8aA_ not modelled 5.8 60 PDB header:antifreeze protein Chain: A: PDB Molecule:protein (antifreeze protein type iii); PDBTitle: nmr structure of intramolecular dimer antifreeze protein2 rd3, 40 sa structures 57 c3ideD_ not modelled 5.7 33 PDB header:virus like particle Chain: D: PDB Molecule:capsid protein vp2; PDBTitle: structure of ipnv subviral particle 58 c3h9pB_ not modelled 5.5 20 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:putative triphosphoribosyl-dephospho-coa synthase; PDBTitle: crystal structure of putative triphosphoribosyl-dephospho-coa synthase2 from archaeoglobus fulgidus 59 c2okrF_ not modelled 5.4 47 PDB header:transferase Chain: F: PDB Molecule:map kinase-activated protein kinase 2; PDBTitle: crystal structure of the p38a-mapkap kinase 2 heterodimer 60 c2zs1D_ not modelled 5.4 15 PDB header:oxygen storage, oxygen transport Chain: D: PDB Molecule:extracellular giant hemoglobin major globin subunit b1; PDBTitle: structural basis for the heterotropic and homotropic interactions of2 invertebrate giant hemoglobin 61 c1pznG_ not modelled 5.4 41 PDB header:recombination Chain: G: PDB Molecule:dna repair and recombination protein rad51; PDBTitle: rad51 (rada) 62 d1hg7a_ not modelled 5.3 60 Fold:beta-clip Superfamily:AFP III-like domain Family:AFP III-like domain 63 d1bifa1 not modelled 5.3 29 Fold:P-loop containing nucleoside triphosphate hydrolases Superfamily:P-loop containing nucleoside triphosphate hydrolases Family:6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain 64 d2bv3a3 not modelled 5.2 38 Fold:Ribosomal protein S5 domain 2-like Superfamily:Ribosomal protein S5 domain 2-like Family:Translational machinery components 65 d2e50a1 not modelled 5.2 23 Fold:NAP-like Superfamily:NAP-like Family:NAP-like 66 d1ucsa_ not modelled 5.1 60 Fold:beta-clip Superfamily:AFP III-like domain Family:AFP III-like domain