|   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
Query Sequence |   |
I | G | I | S | A | H | I | D | A | G | K | T | T | T | T | E | R | I | L | F | Y | T | G | V | N | H | K | I | G | E | V | H | D | G | A | A | T | M | D | W | M | E | Q | E | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | R |
Query Conservation |   |
|   |
|
|
|
|
|
|   |
|
|
|
|
|   |
|   |
|
|   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
Template Conservation |   |
|
|
|
|
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
I | A | V | V | G | G | Q | S | A | G | K | S | S | V | L | E | N | F | V | G | R | D | F | L | P | R | G | S | G | I | V | T | R | R | P | L | V | L | Q | L | V | N | S | T | T | E | Y | A | E | F | L | H | C | K | G | K | K | F | T | D | F | E | E | V | R | L | E | I | E | A | E | T | D | R | V | T | G | T | N | K |
Template Known Secondary structure |   |
 |  |  |  |  | B | T | T | S |
|  |  |  |  |  |  |  |  |  | T | S |
|
| S |
|
|
| S | S |
| S |
| S | S |
|  |  |  |  |  |  |  |
| S | S |
|  |  |  |  | T | T | S | T | T |
|
| B |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
34 | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
  |
  |   |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | |
110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | |
. |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  | . |  |  |  |  |  |
|
|
|
|
|
|  |  |  | . |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
Query Sequence |   |
G | I | T | I | T | S | A | A | T | T | A | F | W | S | G | M | A | K | Q | Y | E | P | H | R | I | N | I | I | D | T | P | G | H | V | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | T | I | E | V | E | R | S | M | R | V | L | D | G | A | . |
V | M | V | Y | C | A | V | G | G | V | Q | P | Q | S | . |
E |
Query Conservation |   |
|
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|
|   |   |
|
|   |   |   |
|
|
| . |
|
|
|
|
|
|   |
|
|
|   |   |
|
| . |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   | . | . | . | . | . | . |   |   |   |
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
G | I | S | P | V | P | I | N | L | R | V | Y | S | P | H | V | L | . |
. |
. |
. |
. |
. |
N | L | T | L | V | D | L | P | G | M | T | K | V | P | V | G | D | Q | P | P | D | I | E | F | Q | I | R | D | M | L | M | Q | F | V | T | K | E | N | C | L | I | L | A | V | S | P | A | N | S | D | L | A | N | S | D | A | L |
Template Known Secondary structure |   |
|
|
| S |
|
|  |  |  |  |  |  |  | T | T |
|
| . | . | . | . | . | . | S |  |  |  |  |  |
|
|
| B |
| S | S |
|
| S | S | S |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | T | T |  |  |  |  |  |  |  |  | S | S | S |
| G | G | G |
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . |
|
|  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
114 | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | |
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . |
  |
  |   |
125 | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | V | W | R | Q | A | N | K | Y | K | V | P | R | I | A | F | V | N | K | M | D | R | M |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|
|
|   |
|   |   |
Template Sequence |   |
K | I | A | K | E | V | D | P | Q | G | Q | R | T | I | G | V | I | T | K | L | D | L | M |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| T | T |
| S | S |  |  |  |  |  |  |
| G | G | G | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
188 | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
  |