Job Description P0A6M8 Confidence 99.92% Date Thu Jan 5 11:03:34 GMT 2012 Rank 42 Aligned Residues 120 % Identity 23% Template d1n0ua3 SCOP info Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Translational machinery components Resolution 2.12

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.																																	.	.	.	530	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	Y	R	E	T	I	R	Q	K	V	T	D	V	E	G	K	H	A	K	Q	S	G	G	R	G	Q	Y	G	H	V	V	I	D	M	Y	P	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	S	N	P	K	G	Y	E
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.
Template Sequence		V	A	Y	R	E	T	V	E	S	E	S	S	Q	.	.	.	.	.	T	A	L	S	K	S	P	N	K	H	N	R	I	Y	L	K	A	E	P	I	D	E	E	V	S	L	A	I	E	N	G	I	I	N	P	R	D	D	F	K	A	R	A	R	I	M	A	D	D	Y	G	W	D	V	T	D	A	R	K	I	W	C
Template Known Secondary structure									S	S			S	S	.	.	.	.	.							T	T	S	S																				T	T	S	S		T	T	S												T	T									T
Template Predicted Secondary structure															.	.	.	.	.
Template SS confidence
		561	.	.	.	.	.	.	.	.	570	.	.	.						.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.
		536											.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.			.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.																																																				.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.																																																				.	.
Query Sequence		F	.	.	.	.	.	.	.	.	.	.	I	N	D	I	K	G	G	V	I	P	G	E	Y	I	P	A	V	D	K	G	I	Q	E	Q	L	K	A	G	P	L	A	G	Y	P	V	V	D	M	G	I	R	L	H	F	G	S	Y	H	D	V	D	.	.	S	S	E	L	A	F	K	L	A	A	S	I	A	F	K	E
Query Conservation			.	.	.	.	.	.	.	.	.	.																																																				.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.																																																				.	.
Template Conservation
Template Sequence		F	G	P	D	G	N	G	P	N	L	V	I	D	Q	T	K	A	V	Q	Y	L	H	E	I	K	D	S	V	V	A	A	F	Q	W	A	T	K	E	G	P	I	F	G	E	E	M	R	S	V	R	V	N	I	L	D	V	T	L	H	A	D	A	I	H	R	G	G	G	Q	I	I	P	T	M	R	R	A	T	Y	A
Template Known Secondary structure			S	S	T	T	T	S	S											T	T																		S		T	T	T	S			B		S												S	S	G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		636	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.
		604	.	.	.	.	.	610	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	K	K	A	K	P	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	F	L	L	A	D	P	K	I
Template Known Secondary structure						S
Template Predicted Secondary structure
Template SS confidence
		716	.	.	.	720	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions