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Job DescriptionP0A6M8
Confidence100.00%DateThu Jan 5 11:03:34 GMT 2012
Rank8Aligned Residues471
% Identity25%Templatec3tr5C_
PDB info PDB header:translationChain: C: PDB Molecule:peptide chain release factor 3; PDBTitle: structure of a peptide chain release factor 3 (prfc) from coxiella2 burnetii
Resolution2.11 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  TTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWSGMAKQYEPHR
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Template Sequence  EKQTAXRRTFAIISHPDAGKTTLTEKLLLFGGAIQLAGTIKSRHATSDWXELEKQVTTSV. . . . XQFPYKD. . . . . . . YL
Template Known Secondary structure  T

TTSST
T



TT


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   4.....10.........20.........30.........40.........50.........60... ......70 ..
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  INIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVNQIKTRLG
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Template Sequence  INLLDTPGHADFTEDTYRTLTAVDSALXVIDAAKGVEPRTIKLXEVCRLRHTPIXTFINKXDRDTRPSIELLDEIESILR
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STT

GGG
STTTBS
TTT


TTS



S
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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  ANPVPLQLAIGAEEHFTGVVDLVKMKAINWNDADQGVTFEYEDIPADMVELANEWHQNLIESAAEASEELMEKYLGGEEL
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Template Sequence  IHCAPVTWPIGXGKYFKGIYHLIEDAIYLYQPSERIEGINN. . . . . . . . . . . . . . . . . . . PELDKKLGDLASELRNEIEL
Template Known Secondary structure 
SS
TT


TTTT





TT
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   161........170.........180.........190.........200. ........210.........220.
 
   244.....250.........260.........270.........280.........290.........300.........310.........320...
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Query Sequence  TEAEIKGALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIDYLPSPVDVPAINGILDDGKDTPAERHASDDEPFSALAFK
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Template Sequence  VKGASHPFEREGYLKGELTPIFFGSAINNFGVGELLDAFVKEAPPPQGRETNS. . . . . . . . . . . RLVKPEEEKFSGFVFK
Template Known Secondary structure  S



TS
BGGGTBSS




BSS...........

TT
SS
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   230.........240.........250.........260.........270.........280.. .......290........
 
   324... ..330.........340.........350.........360.........370.........380.........390.........400
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Query Sequence  IATD. . . PFVGNLTFFRVYSGVVNSGDTVLNSVKAARERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDP
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Template Sequence  IQANXDPGHRDRIAFLRIASGQYQKGXKAYHVRLKKEIQINNALTFXAGKRENAEEAWPGDIIGLHNHGTIQIGDTFTQG
Template Known Secondary structure 

STT


S
TTGGGTSS
B

BTT
SS

S
TT
SS


TT
SS
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   299300.........310.........320.........330.........340.........350.........360.........370........
 
   401........410.........420.........430.........440.........450.........460.........470.........480
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Query Sequence  DAPIILERMEFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVWTDEESNQTIIAGMGELHLDIIVDRMKREFNVE
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Template Sequence  E. RFKFTGIPNFASELFRLVRLKDPLKQKALLKGLTQLSEEGATQ. LFRPLDSNELILGAVGLLQFDVVAYRLENEYNVK
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B





SSGGGTTS
.TTSS
SST


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   379 380.........390.........400.........410.........420.. .......430.........440.........450......
 
   481....... .490.........500 ........ .510.......
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Query Sequence  ANVGKPQV. AYRETIRQKVTD. . . . . . VEGKHAKQ. SGGRGQYGH
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Template Sequence  CVYESVNVVTARWVICDDKAVLERFNQEQSRNLAYDGGGHLTYLA
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S


S
GGGTTS
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   457..460.........470.........480.........490.........500.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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