Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6M8
Confidence98.03%DateThu Jan 5 11:03:34 GMT 2012
Rank205Aligned Residues122
% Identity18%Templatec3p1jB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:gtpase imap family member 2; PDBTitle: crystal structure of human gtpase imap family member 2 in the2 nucleotide-free state
Resolution2.58 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40.........50.........60.........70.........80.........90.
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  NIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWSGMAKQYEPHRINIIDTPG
Query Conservation 

 





 




 
 

   
 
   
         
    
 








 

              







Alig confidence 



















..











....................................









Template Conservation   
 


   







 
 ..
  
        ....................................      

 
Template Sequence  RIILVGKTGTGKSAAGNSIL. . RKTLTKTCSKSQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GEIVIIDTPD
Template Known Secondary structure  S
..T




S
....................................



G
Template Predicted Secondary structure 





..





....................................



Template SS confidence 















































































   24.....30.........40... ......50..... ....60.....
 
   92... ....100.........110.........120.........130..... ....140...... ...150.
Predicted Secondary structure 
...........









....




.....



Query SS confidence 



. . . . . . . . . . .







































. . . .










. . . . .




Query Sequence  HVDF. . . . . . . . . . . TIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYKV. . . . PRIAFVNKMDR. . . . . MGANF
Query Conservation 
 

...........  

  

   








 


  

   
       
....
 








.....    
Alig confidence 



...........







































....










.....




Template Conservation                                                               


  
 
           
Template Sequence  MFSWKDHCEALYKEVQRCYLLSAPGPHVLLLVTQLGRYTSQDQQAAQRVKEIFGEDAMGHTIVLFTHNGGSLMDYMHDSD
Template Known Secondary structure  GGGSS


TT

STT



GGGGGG



Template Predicted Secondary structure 






























Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
   152.......160.........170.
Predicted Secondary structure 


Query SS confidence 



















Query Sequence  LKVVNQIKTRLGANPVPLQL
Query Conservation       

   
         
Alig confidence 



















Template Conservation     
              

Template Sequence  NKALSKLVAACGGRICAFNN
Template Known Secondary structure 
TTT


Template Predicted Secondary structure 



Template SS confidence 



















   165....170.........180....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions