|   |
13 | . | . | . | . | . | . | |
20 | . | . | . | . | . | . | . | . | . | 30 | |
|
|
. | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
| . |
|
|
|  |  |  |  |  |  |  |  | . | . | . |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | G | I | S | A | H | I | . |
D | A | G | K | T | T | T | T | E | R | I | . |
. |
. |
L | F | Y | T | G | V | N | H | K | I | G | E | V | H | D | G | A | A | T | M | D | W | M | E | Q | E | Q | E | R | G | I | T | I | T | S | A | A | T | T | A | F | W | S | G | M | A | K | Q | Y | E | P | H | R | I | N | I | I | D |
Query Conservation |   |
|   |
|
|
|
|
| . |
|   |
|
|
|
|
|   |
|   |
| . | . | . |
|   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|   |
|
|
|
|
|
|
|
|   |
|   |   |
|
|   |   |
|
|   |   |
| . |   |
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
Template Sequence |   |
I | T | V | A | S | F | K | G | G | V | G | K | T | T | T | A | V | H | L | S | A | Y | L | A | L | Q | G | . |
E | T | L | L | I | D | G | D | P | N | R | S | A | T | G | W | G | K | R | G | . |
. |
. |
. |
. |
. |
. |
S | L | P | F | K | V | V | D | E | R | Q | A | A | K | Y | A | P | K | Y | Q | N | I | V | I | D |
Template Known Secondary structure |   |
 |  |  |  |  | S | S | S | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | . |
|  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |  | T | S | . | . | . | . | . | . | . |
|
| S | S |  |  |  |  | G | G | G |  |  |  |  | G | G | G |
| S |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
| . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
  |
  |   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | |
. | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | P | G | H | V | D | F | T | I | E | V | E | R | S | M | R | V | L | D | G | A | V | M | V | Y | C | A | V | G | G | V | Q | P | Q | S | E | T | V | W | R | Q | A | N | K | Y | K | V | P | . |
R | I | A | F | V | N | K | M | D | R | M | G | A | N | F | L | K | V | V | N | Q | I | K | T | R | L | G | A | N | P | V |
Query Conservation |   |
|
|
|
|   |
|
|   |   |
|
|   |   |
|
|   |   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|
| . |   |
|
|
|
|
|
|
|
|
|   |   |   |   |
|   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
T | Q | A | R | D | . |
. |
. |
. |
. |
L | E | A | L | A | D | G | C | D | L | L | V | I | P | S | T | P | D | A | L | A | L | D | A | L | X | L | T | I | E | T | L | Q | K | L | G | N | N | R | F | R | I | L | L | T | I | I | P | P | Y | P | S | K | D | G | D | E | A | R | Q | L | L | T | T | A | G | L | P | L | F |
Template Known Secondary structure |   |
 |  |
|
|
| . | . | . | . | . |  |  |  |  |  |  | T | S | S |  |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  | T | T |
| G | G | G |  |  |  |  |  |
| S | B |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| B |
|
Template Predicted Secondary structure |   |
|
|
|
|  | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
75 | . | . | . | . | |
|
|
|
|
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . |
  |
  |   |
168 |
Predicted Secondary structure |   |
 |
Query SS confidence |   |
|
Query Sequence |   |
P |
Query Conservation |   |
  |
Alig confidence |   |
|
Template Conservation |   |
  |
Template Sequence |   |
K |
Template Known Secondary structure |   |
S |
Template Predicted Secondary structure |   |
|
Template SS confidence |   |
|
  |   |
154 |
  |