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Job DescriptionP0A6M8
Confidence98.05%DateThu Jan 5 11:03:34 GMT 2012
Rank204Aligned Residues167
% Identity17%Templatec3clvA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:rab5 protein, putative; PDBTitle: crystal structure of rab5a from plasmodium falciparum,2 pfb0500c
Resolution1.89 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWSGMAKQYE
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Template Sequence  MEKKSSY. . . . KTVLLGESSVGKSSIVLRLTKDTFHENTNTTIGA. . . . . . . . . . . . . . . . . SFCTYVVNLNDNYNENLC
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Query Sequence  PHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQ. . ANKYKVPRIAFVNKMDRMGANFLKVVNQI
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Template Sequence  NIKFDIWDTAGQERYASIVPLYYRGATCAIVVFDISNSNTLDRAKTWVNQLKISSNYIIILVANKIDKNFQVDILEVQKY
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   92.......100.........110.........120.........130.........140.........150.........160.........170.
 
   159160.........170.........180.........190.........200.........210.........220.........230........
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Query Sequence  KTRLGANPVPLQLAIGAEEHFTGVVDLVKMKAINWNDADQGVTFEYEDIPADMVELANEWHQNLIESAAEASEELMEKYL
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Template Sequence  AQDNNLLFIQT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   173......180...
 
   239240.........250.........260.........270.........280......
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Query Sequence  GGEELTEAEIKGALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIDYL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SAKTGTNIKNIFYMLAEEI
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   184.....190.........200..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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