Job Description P0A6M8 Confidence 97.16% Date Thu Jan 5 11:03:34 GMT 2012 Rank 283 Aligned Residues 143 % Identity 17% Template c3b9qA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:chloroplast srp receptor homolog, alpha subunit PDBTitle: the crystal structure of cpftsy from arabidopsis thaliana Resolution 1.75 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.						.
Query SS confidence																																																			.	.	.	.						.
Query Sequence		M	A	R	T	T	P	I	A	R	Y	R	N	I	G	I	S	A	H	I	D	A	G	K	T	T	T	T	E	R	I	L	F	Y	T	G	V	N	H	K	I	G	E	V	H	D	G	A	A	T	.	.	.	.	M	D	W	M	E	.	Q	E	Q	E	R	G	I	T	I	T	S	A	A	T	T	A	F	W	S	G	M
Query Conservation																																																			.	.	.	.						.
Alig confidence																																																			.	.	.	.						.
Template Conservation
Template Sequence		T	E	L	Q	L	G	F	R	K	P	A	V	I	M	I	V	G	V	N	G	G	G	K	T	T	S	L	G	K	L	A	H	R	L	K	N	E	G	T	K	V	L	M	A	A	G	D	T	F	R	A	A	A	S	D	Q	L	E	I	W	A	E	R	T	G	C	E	I	V	V	A	E	K	A	K	A	A	T	V	L
Template Known Secondary structure			S					S	S	S										T	T	S																T	T											S																T
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		76	.						.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.													.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	K	.	.	.	.	.	Q	Y	E	P	H	R	I	N	I	I	D	T	P	G	H	V	D	F	T	I	E	V	E	R	S	M	R	V	L	.	.	.	.	.	.	.	.	.	.	.	.	D	G	A	V	M	V	Y	C	A	V	G	G	V	Q	P	Q	S	E	T	V	W	R	Q	A	N	K	Y	K	V	P	R	I
Query Conservation				.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation																																																														.	.
Template Sequence		S	K	A	V	K	R	G	K	E	E	G	Y	D	V	V	L	C	D	T	S	G	R	L	H	T	N	Y	S	L	M	E	E	L	I	A	C	K	K	A	V	G	K	I	V	S	G	A	P	N	E	I	L	L	V	L	D	G	N	T	G	.	.	L	N	M	L	P	Q	A	R	E	F	N	E	V	V	G	I	T	G
Template Known Secondary structure											T	T		S										S	S																		T	T	S	T	T			S								G	G	G	G	.	.	G	G	G											T
Template Predicted Secondary structure																																																														.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.			.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		139	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	V	N	K	M	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	I	L	T	K	L	D
Template Known Secondary structure								S
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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