Job Description P0A6M8 Confidence 97.01% Date Thu Jan 5 11:03:34 GMT 2012 Rank 293 Aligned Residues 127 % Identity 16% Template c2xtzB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:guanine nucleotide-binding protein alpha-1 subunit; PDBTitle: crystal structure of the g alpha protein atgpa1 from2 arabidopsis thaliana Resolution 2.34 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	R	N	I	G	I	S	A	H	I	D	A	G	K	T	T	T	T	E	R	I	L	F	Y	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	R	K	L	L	L	L	G	A	G	E	S	G	K	S	T	I	F	K	Q	I	K	L	L	F	Q	T	G	F	D	E	G	E	L	K	S	Y	V	P	V	I	H	A	N	V	Y	Q	T	I	K	L	L	H	D	G	T	K	E	F	P	R	L	T	K	D	I	A	E	G	I	E	T	L	W	K	D	P	A	I	Q
Template Known Secondary structure										S	T	T	S	S													S
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
									36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	V	N	H	K	I	G	E	V	H	D	G	A	A	T	M	D	W	M	E	Q	E	Q	E	R	G	I	T	I	T	S	A	A	T	T	A	F	W	S	G	M	A	K	Q	Y	E	P	H	R	I	N	I	I	D	T	P	G	H	V	D	F	T	I	E	V	E	R	S	M	R	V	L	D	G
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.
Template Sequence		E	T	P	D	T	K	Y	L	M	E	N	L	K	R	L	S	D	I	N	Y	I	P	T	K	E	D	V	L	Y	A	R	V	R	T	T	G	V	V	E	I	Q	F	S	P	E	V	.	.	.	.	.	.	.	.	.	Y	R	L	F	D	V	G	G	Q	R	N	E	R	R	K	W	I	H	L	F	E	G	V	T	A
Template Known Secondary structure												T							T	T																	S											.	.	.	.	.	.	.	.	.									S	G	G	G	G	G	G	T	G	G	G		T	T
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.										.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		109	110	.	.	.	.	.	.	.												.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.					.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Query Sequence		A	V	M	V	Y	C	A	V	G	.	.	.	.	.	.	.	.	.	.	.	G	V	Q	P	Q	S	E	T	V	W	R	Q	A	N	K	Y	K	.	.	.	.	V	P	R	I	A	F	V	N	K	M	D
Query Conservation											.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.
Template Conservation
Template Sequence		V	I	F	C	A	A	I	S	E	Y	D	Q	T	L	F	E	D	E	Q	K	N	R	M	M	E	T	K	E	L	F	D	W	V	L	K	Q	P	C	F	E	K	T	S	F	M	L	F	L	N	K	F	D
Template Known Secondary structure								G	G	G	T	T		B		S	S		T	T	S	B														T		G	G	G	S	S
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions