Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6M8
Confidence98.84%DateThu Jan 5 11:03:34 GMT 2012
Rank128Aligned Residues132
% Identity20%Templatec2x2fD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:dynamin-1; PDBTitle: dynamin 1 gtpase dimer, short axis form
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40.........50...... ...
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Query Sequence  IGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QER
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Template Sequence  IAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLVLQLVNATTEYAEFLHCKGKKFTDFEEVRLEIEAETDRVTGTNK
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BTTSSTTT
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   34.....40.........50.........60.........70.........80.........90.........100.........110...
 
   60.........70.........80.........90. ........100...... ...110.........120... .
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Query Sequence  GITITSAATTAFWSGMAKQYEPHRINIIDTPG. . . . . . . . HVDFTIEVERSMRVL. . . . . . DGAVMVYCAVGGVQPQS. E
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Template Sequence  GISPVPINLRVYSPHVL. . . . . . NLTLVDLPGXTKVPVGDQPPDIEFQIRDXLXQFVTKENCLILAVSPANSDLANSDAL
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   114.....120.........130 .........140.........150.........160.........170.........180.......
 
   125....130.........140.........150
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Query Sequence  TVWRQANKYKVPRIAFVNKMDRMGAN
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Template Sequence  KVAKEVDPQGQRTIGVITKLDLXDEG
Template Known Secondary structure 
TT
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TT
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   188.190.........200.........210...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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