Job Description P0A6M8 Confidence 100.00% Date Thu Jan 5 11:03:34 GMT 2012 Rank 1 Aligned Residues 684 % Identity 98% Template c2rdo7_ PDB info PDB header:ribosome Chain: 7: PDB Molecule:elongation factor g; PDBTitle: 50s subunit with ef-g(gdpnp) and rrf bound Resolution 9.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	R	T	T	P	I	A	R	Y	R	N	I	G	I	S	A	H	I	D	A	G	K	T	T	T	T	E	R	I	L	F	Y	T	G	V	N	H	K	I	G	E	V	H	D	G	A	A	T	M	D	W	M	E	Q	E	Q	E	R	G	I	T	I	T	S	A	A	T	T	A	F	W	S	G	M	A	K	Q	Y	E
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template Sequence		M	A	R	T	T	P	I	A	R	Y	R	N	I	G	I	S	A	H	I	D	A	G	K	T	T	T	T	E	R	I	L	F	Y	T	G	V	N	H	K	I	G	E	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	A	T	T	A	F	W	S	G	M	A	K	Q	Y	E	P	.	.	.	.	.	.
Template Known Secondary structure			T	T				G	G	G										T	T	S	S															T	T	T	T	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	S	S								S	S	S	S	S	S			.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.														.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		P	H	R	I	N	I	I	D	T	P	G	H	V	D	F	T	I	E	V	E	R	S	M	R	V	L	D	G	A	V	M	V	Y	C	A	V	G	G	V	Q	P	Q	S	E	T	V	W	R	Q	A	N	K	Y	K	V	P	R	I	A	F	V	N	K	M	D	R	M	G	A	N	F	L	K	V	V	N	Q	I	K	T
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	H	R	I	N	I	I	D	T	P	G	H	V	D	F	T	I	E	V	E	R	S	M	R	V	L	D	G	A	V	M	V	Y	C	A	V	G	G	V	Q	P	Q	S	E	T	V	W	R	Q	A	N	K	Y	K	V	P	R	I	A	F	V	N	K	M	D	R	M	G	A	N	F	L	K	V	V	N	Q	I	K	T
Template Known Secondary structure		.												S	S											T		S								T	T		S	S		S	T												T			B							T	T	S	T	T			S
Template Predicted Secondary structure		.
Template SS confidence
			82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	G	A	N	P	V	P	L	Q	L	A	I	G	A	E	E	H	F	T	G	V	V	D	L	V	K	M	K	A	I	N	W	N	D	A	D	Q	G	V	T	F	E	Y	E	D	I	P	A	D	M	V	E	L	A	N	E	W	H	Q	N	L	I	E	S	A	A	E	A	S	E	E	L	M	E	K	Y	L	G	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	G	A	N	P	V	P	L	Q	L	A	I	G	A	E	E	H	F	T	G	V	V	D	L	V	K	M	K	A	I	N	W	N	D	A	D	Q	G	V	T	F	E	Y	E	D	I	P	A	D	M	V	E	L	A	N	E	W	H	Q	N	L	I	E	S	A	A	E	A	S	E	E	L	M	E	K	Y	L	G	G
Template Known Secondary structure		T	S											S	S		T	T								T	T	T	T						S		S	S						B						S	S	S																	T	T											T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	L	T	E	A	E	I	K	G	A	L	R	Q	R	V	L	N	N	E	I	I	L	V	T	C	G	S	A	F	K	N	K	G	V	Q	A	M	L	D	A	V	I	D	Y	L	P	S	P	V	D	V	P	A	I	N	G	I	L	D	D	G	K	D	T	P	A	E	R	H	A	S	D	D	E	P	F	S	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	L	T	E	A	E	I	K	G	A	L	R	Q	R	V	L	N	N	E	I	I	L	V	T	C	G	S	A	F	K	N	K	G	V	Q	A	M	L	D	A	V	I	D	Y	L	P	S	P	V	D	V	P	A	I	N	G	I	L	D	D	G	K	D	T	P	A	E	R	H	A	S	D	D	E	P	F	S	A	L
Template Known Secondary structure																			T	T	S									T	T	T	T		S											T	S			T	T	T	S								S	S	S	S										T	T	S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	K	I	A	T	D	P	F	V	G	N	L	T	F	F	R	V	Y	S	G	V	V	N	S	G	D	T	V	L	N	S	V	K	A	A	R	E	R	F	G	R	I	V	Q	M	H	A	N	K	R	E	E	I	K	E	V	R	A	G	D	I	A	A	A	I	G	L	K	D	V	T	T	G	D	T	L	C	D	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	K	I	A	T	D	P	F	V	G	N	L	T	F	F	R	V	Y	S	G	V	V	N	S	G	D	T	V	L	N	S	V	K	A	A	R	E	R	F	G	R	I	V	Q	M	H	A	N	K	R	E	E	I	K	E	V	R	A	G	D	I	A	A	A	I	G	L	K	D	V	T	T	G	D	T	L	C	D	P
Template Known Secondary structure									S	S	S											S				T	T						T	T	S	S													S	S	S			B		S				T	T						S				S			S	S						S
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	P	I	I	L	E	R	M	E	F	P	E	P	V	I	S	I	A	V	E	P	K	T	K	A	D	Q	E	K	M	G	L	A	L	G	R	L	A	K	E	D	P	S	F	R	V	W	T	D	E	E	S	N	Q	T	I	I	A	G	M	G	E	L	H	L	D	I	I	V	D	R	M	K	R	E	F	N	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	P	I	I	L	E	R	M	E	F	P	E	P	V	I	S	I	A	V	E	P	K	T	K	A	D	Q	E	K	M	G	L	A	L	G	R	L	A	K	E	D	P	S	F	R	V	W	T	D	E	E	S	N	Q	T	I	I	A	G	M	G	E	L	H	L	D	I	I	V	D	R	M	K	R	E	F	N	V	E
Template Known Secondary structure		S				B		S																S	S																			T	T							T	T	T								S														T	T	S
Template Predicted Secondary structure
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	V	G	K	P	Q	V	A	Y	R	E	T	I	R	Q	K	V	T	D	V	E	G	K	H	A	K	Q	S	G	G	R	G	Q	Y	G	H	V	V	I	D	M	Y	P	L	E	P	G	S	N	P	K	G	Y	E	F	I	N	D	I	K	G	G	V	I	P	G	E	Y	I	P	A	V	D	K	G	I	Q	E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	N	V	G	K	P	Q	V	A	Y	R	E	T	I	R	Q	K	V	T	D	V	E	G	K	H	A	K	Q	S	G	G	R	G	Q	Y	G	H	V	V	I	D	M	Y	P	L	E	P	G	S	N	P	K	G	Y	E	F	I	N	D	I	K	G	G	V	I	P	G	E	Y	I	P	A	V	D	K	G	I	Q	E	Q
Template Known Secondary structure								B							B			S										B			S	S	S		B	B											S	T	T		S	S		S									S	S	S	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
		561	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	A	G	P	L	A	G	Y	P	V	V	D	M	G	I	R	L	H	F	G	S	Y	H	D	V	D	S	S	E	L	A	F	K	L	A	A	S	I	A	F	K	E	G	F	K	K	A	K	P	V	L	L	E	P	I	M	K	V	E	V	E	T	P	E	E	N	T	G	D	V	I	G	D	L	S	R	R	R	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	A	G	P	L	A	G	Y	P	V	V	D	M	G	I	R	L	H	F	G	S	Y	H	D	V	D	S	S	E	L	A	F	K	L	A	A	S	I	A	F	K	E	G	F	K	K	A	K	P	V	L	L	E	P	I	M	K	V	E	V	E	T	P	E	E	N	T	G	D	V	I	G	D	L	S	R	R	R	G
Template Known Secondary structure		T	T	S		T	T	T	S					S												T	T	T	B																				T		B															G	G	G	S										T	T
Template Predicted Secondary structure
Template SS confidence
		561	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640
		641	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	K	G	Q	E	S	E	V	T	G	V	K	I	H	A	E	V	P	L	S	E	M	F	G	Y	A	T	Q	L	R	S	L	T	K	G	R	A	S	Y	T	M	E	F	L	K	Y	D	E	A	P	S	N	V	A	Q	A	V	I	E	A	R	G	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	L	K	G	Q	E	S	E	V	T	G	V	K	I	H	A	E	V	P	L	S	E	M	F	G	Y	A	T	Q	L	R	S	L	T	K	G	R	A	S	Y	T	M	E	F	L	K	Y	D	E	A	P	S	N	V	A	Q	A	V	I	E	A	R	G	K
Template Known Secondary structure										T	T														T	T										T	S																	S	S	S	S						T
Template Predicted Secondary structure
Template SS confidence
		641	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.