Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6M8
Confidence100.00%DateThu Jan 5 11:03:34 GMT 2012
Rank12Aligned Residues462
% Identity19%Templatec1wb1C_
PDB info PDB header:protein synthesisChain: C: PDB Molecule:translation elongation factor selb; PDBTitle: crystal structure of translation elongation factor selb2 from methanococcus maripaludis in complex with gdp
Resolution3.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 











































Query SS confidence 















































































Query Sequence  ARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWSGMAKQYEP
Query Conservation      
   



 





 




 
 

   
 
   
         
    
 








 

            
Alig confidence 








.


















...........
































.......
Template Conservation      
 
 
.

 
 



 




   
...........         
    
   



           .......
Template Sequence  RPHMDFKNI. NLGIFGHIDHGKTTLSKVL. . . . . . . . . . . TEIASTSAHDKLPESQKRGITIDIGFSAFKLEN. . . . . . .
Template Known Secondary structure  S




B

.



TTSSTT...........TTTSS
SS
SSSSTTTTS




SS

TT.......
Template Predicted Secondary structure 







.





...........














.......
Template SS confidence 















































































  
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions