Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6M8
Confidence98.07%DateThu Jan 5 11:03:34 GMT 2012
Rank202Aligned Residues109
% Identity12%Templatec1gwnA_
PDB info PDB header:gtpaseChain: A: PDB Molecule:rho-related gtp-binding protein rhoe; PDBTitle: the crystal structure of the core domain of rhoe/rnd3 - a2 constitutively activated small g protein
Resolution2.1 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40.........50.........60.........70.........80.........90..
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  IGISAHIDAGKTTTTERILFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTAFWSGMAKQYEPHRINIIDTPGH
Query Conservation 
 





 




 
 

   
 
   
         
    
 








 

              








Alig confidence 


























........................




























Template Conservation 




   






       
    ........................  
                          
Template Sequence  IVVVGDSQCGKTALLHVFAKDCFPENY. . . . . . . . . . . . . . . . . . . . . . . . VPTVFENYTASFEIDTQRIELSLWDTSGS
Template Known Secondary structure  STTSSS


SS
........................


SSSSS

S
Template Predicted Secondary structure 












........................
















Template SS confidence 















































































   26...30.........40.........50.. .......60.........70.........80.
 
   93......100.........110.........120......... 130.........140.....
Predicted Secondary structure 






....






Query SS confidence 




































. . . .















Query Sequence  VDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQ. . . . ANKYKVPRIAFVNKMD
Query Conservation   

  

  

   








 


  

   
  ....     

 







Alig confidence 




































....















Template Conservation                   
   
                         




 

 
Template Sequence  PYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSD
Template Known Secondary structure  GGGTTTGGGG
TT
STT
T
TT

GG
Template Predicted Secondary structure 






























Template SS confidence 
























































   82.......90.........100.........110.........120.........130........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions