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Job DescriptionP0A6M8
Confidence100.00%DateThu Jan 5 11:03:34 GMT 2012
Rank15Aligned Residues302
% Identity23%Templatec1g7cA_
PDB info PDB header:translationChain: A: PDB Molecule:elongation factor 1-alpha; PDBTitle: yeast eef1a:eef1ba in complex with gdpnp
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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Query Sequence  NIGISAHIDAGKTTTTERILFYTGVNHK. . . . . . . IGEVHDGAA. . . . . . TMDWMEQEQERGITITSAATTAFWSGMAKQ
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Template Sequence  NVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPK. . . .
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TTS
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Query Sequence  YEPHRINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQP. . . . . . . QSETVWRQANKYKVP. RIAFVNKMDRMGAN
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Template Sequence  . . . YQVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGVGEFEAGISKDGQTREHALLAFTLGVRQLIVAVNKMDSVKWD
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   85....90.........100.........110.........120.........130.........140.........150.........160.
 
   151........160.........170.........180.........190.........200.........210.........220.........230
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Query Sequence  FLKVVNQIKTRLGANPVPLQLAIGAEEHFTGVVDLVKMKAINWNDADQGVTFEYEDIPADMVELANEWHQNLIESAAEAS
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Template Sequence  . . . . . ESRFQEI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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   162......
 
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Query Sequence  EELMEKYLGGEELTEAEIKGALRQRVLNNEIILVTCGSAFKNKGVQAMLDAVIDYLPSPVDVPAIN. . . GILDDGKDTPA
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Template Sequence  . . . . . . . . . . . . . . VKETSNFIKKVGYNPKTVPFVPISGWNGDNMIEATTNAPWYKGWEKETKAGVVKGKTLLEAIDAIE
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GGG



TTT
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   169170.........180.........190.........200.........210.........220.........230....
 
   308.310.........320.........330.........340.........350.........360.........370.........380.....
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Query Sequence  ERHASDDEPFSALAFKIATDPFVGNLTFFRVYSGVVNSGDTVLNSVKAARERFGRIVQMHANKREEIKEVRAGDIAAA. .
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Template Sequence  QPSRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPAGVTTEVKSVEM. . . . HHEQLEQGVPGDNVGFNV
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   235....240.........250.........260.........270.........280.........290.. .......300.........310
 
   386...390.........400.........410.
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Query Sequence  . . IGLKDVTTGDTLCDPDAPIILERMEF
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Template Sequence  KNVSVKEIRRGNVCGDAKNDPPKGCASF
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   311........320.........330........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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