Job Description P0A6M8 Confidence 96.22% Date Thu Jan 5 11:03:34 GMT 2012 Rank 327 Aligned Residues 104 % Identity 16% Template c1f5nA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:interferon-induced guanylate-binding protein 1; PDBTitle: human guanylate binding protein-1 in complex with the gtp2 analogue, gmppnp. Resolution 1.70 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	Y	R	N	I	G	I	S	A	H	I	D	A	G	K	T	T	T	T	E	R	I	L	F	Y	T	G	V	N	H	K	I	G	E	V	H	D	G	A	A	T	M	D	W	M	E	Q	E	Q	E	R	G	I	T	I	T	S	A	A	T	T	A	F	W	S	G	M	A	K	Q	Y	E	P	H	R	I	N	I	I
Query Conservation
Alig confidence																																.												.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Template Conservation																																.												.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Template Sequence		Q	P	M	V	V	V	A	I	V	G	L	Y	R	T	G	K	S	Y	L	M	N	K	L	A	G	K	K	K	G	F	.	S	L	G	S	T	V	Q	S	H	T	K	.	.	.	.	.	.	.	.	.	.	G	I	W	M	W	C	V	P	H	.	.	.	.	.	.	.	.	P	K	K	P	G	H	I	L	V	L	L
Template Known Secondary structure		S	B									B	T	T	S	S									T	T		S	S		S	.					S	S	S					.	.	.	.	.	.	.	.	.	.	S									.	.	.	.	.	.	.	.	S	S	S	T	T
Template Predicted Secondary structure																																.												.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.											.	.	.	80	.	.	.	.	.									.	.	.	.	90	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.							.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure											.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.
Query Sequence		D	T	P	G	H	V	D	F	T	.	.	.	.	.	.	I	E	V	E	R	S	M	R	V	L	D	G	A	V	M	V	Y	C	A	V	G	G	V	Q	P	Q	S	E	T	V	W	R	Q	A
Query Conservation											.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.
Template Conservation
Template Sequence		D	T	E	G	L	G	D	V	E	K	G	D	N	Q	N	D	S	W	I	F	A	L	A	V	L	L	S	S	T	F	V	Y	N	S	I	G	T	I	N	Q	Q	A	M	D	Q	L	Y	Y	V
Template Known Secondary structure						B			G	G	G				T	T													S								S		S	S						T	T
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions