 |
Job Description | P71297 | Confidence | 1.74% | Date | Thu Jan 5 12:12:43 GMT 2012 |
Rank | 97 | Aligned Residues | 33 |
% Identity | 30% | Template | c2kxjA_ |
PDB info |
PDB header:protein binding | Chain: A: PDB Molecule:ubx domain-containing protein 4; |
PDBTitle: solution structure of ubx domain of human ubxd2 protein
|
Resolution | UNK |
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | L | A | A | I | R | A | R | W | C | I | N | S | S | K | T | T | Q | S | F | N | D | P | A | S | M | E | E | V | V | E | Y | L | K |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |
|
|
| . |
|
|
|   |   |
|   |   |   |
|   |   |   |   |
|
|   |   |
|   |   |
|
|   |
Template Sequence |   |
T | V | A | R | I | Q | F | R | L | . |
P | D | G | S | S | F | T | N | Q | F | P | S | D | A | P | L | E | E | A | R | Q | F | A | A |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |
| . | T | T | S |
|  |  |  |  |  |  |  | S | S | S | B | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
318 | . | 320 | . | . | . | . | . | . | |
. | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|