Return to main results Retrieve Phyre Job Id

Job DescriptionP0AB67
Confidence41.11%DateThu Jan 5 11:14:45 GMT 2012
Rank94Aligned Residues66
% Identity24%Templated1j6ua2
SCOP infoMurD-like peptide ligases, peptide-binding domain MurD-like peptide ligases, peptide-binding domain MurCDEF C-terminal domain
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   297..300.........310.........320.........330.........340.........350.........360.........370......
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Query Sequence  EETAELLKNSHSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEIN
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Template Sequence  GNFAKALQLADEVVVTEVYDSG. . . . . . . . KXIWDSLKSLGKEAYFVEKL. . . . . . . . . . . . . . . . . . . . PELEKVISVS
Template Known Secondary structure 
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B

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SG....................GG



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   358.360.........370......... 380.........390......... 400.........
 
   377..380.........390....
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Query Sequence  DDFADTDTVLVIGANDTV
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Template Sequence  EN. . . . TVFLFVGAGDII
Template Known Secondary structure  SS....
SST
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   419420 .........430..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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