Job Description P0AB67 Confidence 92.89% Date Thu Jan 5 11:14:45 GMT 2012 Rank 36 Aligned Residues 139 % Identity 18% Template c2x7jA_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene PDBTitle: structure of the menaquinone biosynthesis protein mend from2 bacillus subtilis Resolution 2.35 Å

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		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.								.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.
Query Sequence		E	H	R	E	I	T	A	E	E	T	A	E	L	L	K	N	S	H	S	V	I	I	T	P	G	Y	G	M	A	V	A	Q	A	Q	Y	P	V	A	E	I	T	E	K	L	R	A	.	.	.	.	.	.	.	R	G	I	N	V	R	F	G	I	H	P	V	A	G	R	L	P	G	H	M	N	V	L	L	A	E	A
Query Conservation																																																.	.	.	.	.	.	.
Alig confidence																																			.													.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.																																				.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	V	D	R	E	S	L	S	D	V	A	E	M	L	A	E	A	E	K	G	M	I	V	C	G	E	L	H	S	D	A	D	K	.	E	N	I	I	A	L	S	K	A	L	Q	Y	P	I	L	A	D	P	L	S	N	L	R	N	G	V	H	D	K	S	T	V	I	D	A	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T	G	G	G											S	S															.											T							G	G	G	T	T	T	B	S	S	S			T	T					.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.																																				.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	P	Y	D	I	V	L	E	M	D	E	I	N	D	D	F	A	D	T	D	T	V	L	V	I	G	A	N	D	T	V	N	P	A	A	Q	D	D	P	K	S	P	I	A	G	M	P	V	L	E	V	W	K	A	Q	N	V	I	V	F	K	R	S	M	N	T	G	Y	A	G	V	Q	N	P	L	F	F	K	E
Query Conservation
Alig confidence		.	.	.								.																	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.
Template Conservation		.	.	.								.																	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.
Template Sequence		.	.	.	Y	D	S	F	L	K	D	.	D	E	L	K	R	K	L	R	P	D	V	V	I	R	F	G	.	.	.	.	.	.	.	.	.	.	P	M	P	V	S	K	P	V	F	L	W	L	K	D	D	P	T	I	Q	Q	I	V	I	D	E	D	G	G	W	R	D	.	.	.	.	.	.	.	.	P	T	Q	A
Template Known Secondary structure		.	.	.					T	T	S	.										S						S	.	.	.	.	.	.	.	.	.	.	S			S												T	T	S							T	T						.	.	.	.	.	.	.	.	T	T	S
Template Predicted Secondary structure		.	.	.								.																	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.
Template SS confidence
					271	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.											.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.									.	.	.	.
		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	T	H	M	L	F	G	D	A	K	A	S	V	D	A	I	L	K	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	H	M	I	H	C	N	A	S	V	F	A	E	E	I	M	A	G	L
Template Known Secondary structure			S					S												T	S
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions