Return to main results Retrieve Phyre Job Id

Job DescriptionP0AB67
Confidence91.07%DateThu Jan 5 11:14:45 GMT 2012
Rank44Aligned Residues137
% Identity12%Templatec1zpdA_
PDB info PDB header:alcohol fermentationChain: A: PDB Molecule:pyruvate decarboxylase; PDBTitle: pyruvate decarboxylase from zymomonas mobilis
Resolution1.86 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   296...300.........310.........320.........330.........340.........350.........360.........370.....
Predicted Secondary structure 





















Query SS confidence 















































































Query Sequence  AEETAELLKNSHSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEI
Query Conservation      
  
  
  














  
 

   
   
  
 




















 



   




Alig confidence 






































































........
Template Conservation 
      
  

 
 
  
 
     
   
  


    

  
   

      
   
   
      ........ 
Template Sequence  VDETLKFIANRDKVAVLVGSKLRAAGAEEAAVKFTDALGGAVATMAAAKSFFPEENALYIGTSWGEVSYPG. . . . . . . . V
Template Known Secondary structure  TT
S

TTTTTTT



GGGTTSS
TTSTT
GGGS
TT........
Template Predicted Secondary structure 



































........
Template SS confidence 















































































   199200.........210.........220.........230.........240.........250.........260......... 270
 
   376...380.........390.........400.........410.........420.........430.........440.........450.....
Predicted Secondary structure 















































Query SS confidence 















































































Query Sequence  NDDFADTDTVLVIGANDTVNPAAQDDPKSPIAGMPVLEVWKAQNVIVFKRSMNTGYAGVQNPLFFKENTHMLFGDAKASV
Query Conservation 
  
  
















  

 


 




 
  

 


 


   




 



   

 

 



 
 
Alig confidence 





























..













....................













Template Conservation     
  

 

 

                ..    
         ....................             
Template Sequence  EKTMKEADAVIALAPVFNDYSTTGWTDIPD. . PKKLVLAEPRSVVV. . . . . . . . . . . . . . . . . . . . NGIRFPSVHLKDYL
Template Known Secondary structure 
SS



TTTTTTTT



..GGG
SS....................TTS

Template Predicted Secondary structure 



















..





....................








Template SS confidence 















































































   271........280.........290.........300 .........310.... .....320........
 
   456...460..
Predicted Secondary structure 
Query SS confidence 






Query Sequence  DAILKAL
Query Conservation    
   
Alig confidence 






Template Conservation    
   
Template Sequence  TRLAQKV
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 






   329330.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions