Job Description P0AB67 Confidence 100.00% Date Thu Jan 5 11:14:45 GMT 2012 Rank 2 Aligned Residues 175 % Identity 63% Template c1pt9B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nad(p) transhydrogenase, mitochondrial; PDBTitle: crystal structure analysis of the diii component of transhydrogenase2 with a thio-nicotinamide nucleotide analogue Resolution 2.42 Å

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		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	E	H	R	E	I	T	A	E	E	T	A	E	L	L	K	N	S	H	S	V	I	I	T	P	G	Y	G	M	A	V	A	Q	A	Q	Y	P	V	A	E	I	T	E	K	L	R	A	R	G	I	N	V	R	F	G	I	H	P	V	A	G	R	L	P	G	H	M	N	V	L	L	A	E	A	K	V	P	Y	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	T	H	T	E	I	N	L	D	N	A	I	D	M	I	R	E	A	N	S	I	I	I	T	P	G	Y	G	L	C	A	A	K	A	Q	Y	P	I	A	D	L	V	K	M	L	T	E	Q	G	K	K	V	R	F	G	I	H	P	V	A	G	R	M	P	G	Q	L	N	V	L	L	A	E	A	G	V	P	Y	D
Template Known Secondary structure							B														S													T	T															T	T									T	T		S	S	S	T	T									T	T			G	G
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	L	E	M	D	E	I	N	D	D	F	A	D	T	D	T	V	L	V	I	G	A	N	D	T	V	N	P	A	A	Q	D	D	P	K	S	P	I	A	G	M	P	V	L	E	V	W	K	A	Q	N	V	I	V	F	K	R	S	M	N	T	G	Y	A	G	V	Q	N	P	L	F	F	K	E	N	T	H	M	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	L	E	M	D	E	I	N	H	D	F	P	D	T	D	L	V	L	V	I	G	A	N	D	T	V	N	S	A	A	Q	E	D	P	N	S	I	I	A	G	M	P	V	L	E	V	W	K	S	K	Q	V	I	V	M	K	R	S	L	G	V	G	Y	A	A	V	D	N	P	I	F	Y	K	P	N	T	A	M	L
Template Known Secondary structure		G								G	G	G	G	G	G		S						S			G	G	G		T						S	S	S	T	T	T	T						G	G	G	S	S							S	S	S				T	T					G	G	G	G	S	T	T
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	D	A	K	A	S	V	D	A	I	L	K	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	D	A	K	K	T	C	D	A	L	Q	A	K	V
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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