Job Description Q47146 Confidence 100.00% Date Thu Jan 5 12:36:21 GMT 2012 Rank 48 Aligned Residues 221 % Identity 22% Template d1ukwa2 SCOP info Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains Resolution 2.40

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		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		R	L	T	A	E	E	Q	A	F	L	D	G	P	V	E	E	A	C	R	.	.	M	A	N	D	F	Q	I	T	H	E	L	A	D	L	P	P	E	L	W	A	Y	L	K	E	H	R	F	F	A	M	I	I	K	K	E	Y	G	G	L	E	F	S	A	Y	A	Q	S	R	V	L	Q	K	L	S	G	V	S	G	I
Query Conservation																					.	.
Alig confidence														.							.	.
Template Conservation														.
Template Sequence		S	L	T	E	E	Q	R	Q	L	Q	A	L	.	A	R	R	F	A	K	E	V	I	L	P	V	A	Q	E	Y	D	E	K	E	E	V	P	W	P	V	I	E	K	L	H	E	V	G	L	L	N	A	I	I	P	E	E	Y	G	G	M	G	L	K	M	L	D	E	V	I	V	G	E	E	L	A	Y	A	C	M	G
Template Known Secondary structure														.								T	T	G	G	G								T													T	T		T	T	T	T	S		G	G	G	T	S
Template Predicted Secondary structure														.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	I	T	V	G	V	P	N	S	L	G	P	G	E	L	L	Q	H	Y	G	T	D	E	Q	K	D	H	Y	L	P	R	L	A	R	G	Q	E	I	P	C	F	A	L	T	S	P	E	A	G	S	D	A	G	A	I	P	D	T	G	I	V	C	M	G	E	W	Q	G	Q	Q	V	L	G	M	R	L	T	W	N
Query Conservation
Alig confidence												.	.																																																						.	.	.	.	.	.	.	.
Template Conservation												.	.																																																						.	.	.	.	.	.	.	.
Template Sequence		I	Y	T	I	P	M	A	S	D	L	.	.	G	I	T	P	V	L	L	A	G	T	E	E	Q	K	E	R	F	L	R	P	L	T	E	K	P	A	L	A	A	F	A	L	S	E	P	G	N	G	S	D	A	A	A	L	K	T	R	A	I	R	Q	G	D	.	.	.	.	.	.	.	.	H	Y	V	L	N	G	T
Template Known Secondary structure												.	.																			G	G	G	T	S	S	S									B	T	T	B	S	S		G	G	G									T	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.	.																																																						.	.	.	.	.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.									.	.	.	180	.	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		K	R	Y	I	T	L	A	P	I	A	T	V	L	G	L	A	F	K	L	S	D	P	E	K	L	L	G	G	A	E	D	L	G	I	T	C	A	L	I	P	T	T	T	P	G	V	E	I	G	R	R	H	F	P	L	N	V	P	F	.	Q	N	G	P	T	R	G	K	D	V	F	V	P	I	D	Y	I	I	G	G
Query Conservation																																																													.
Alig confidence																							.	.	.	.	.	.																																	.
Template Conservation																							.	.	.	.	.	.
Template Sequence		K	M	W	I	S	N	G	G	E	A	E	W	V	V	V	F	A	T	V	N	P	.	.	.	.	.	.	E	L	R	H	K	G	V	V	A	L	V	V	E	R	G	T	P	G	F	K	A	I	K	I	H	G	K	M	G	Q	R	A	S	G	T	Y	E	L	V	F	E	D	V	K	V	P	V	E	N	R	L	G	E
Template Known Secondary structure							T	T	T	T										S		G	.	.	.	.	.	.	G	G	G	G	G	G								T	T		T	T										S	S		T	T	S														G	G	G			S
Template Predicted Secondary structure																							.	.	.	.	.	.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.							.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		356
Predicted Secondary structure
Query SS confidence
Query Sequence		P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		258

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions