Job Description Q47146 Confidence 99.75% Date Thu Jan 5 12:36:21 GMT 2012 Rank 68 Aligned Residues 177 % Identity 15% Template d1u8va2 SCOP info Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains Resolution 1.60

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		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.
Query SS confidence																																																															.	.
Query Sequence		H	R	F	F	A	M	I	I	K	K	E	Y	G	G	L	E	F	S	A	Y	A	Q	S	R	V	L	Q	K	L	S	G	V	S	G	I	L	A	I	T	V	G	V	P	N	S	L	G	P	G	E	L	L	Q	H	Y	G	T	D	E	Q	K	.	.	D	H	Y	L	P	R	L	A	R	G	Q	E	I	P	C	F	A
Query Conservation																																																															.	.
Alig confidence																																												.	.																		.	.
Template Conservation																																												.	.
Template Sequence		R	F	A	N	L	H	Q	S	T	D	D	L	R	K	K	V	K	M	Q	R	L	L	G	Q	K	T	A	S	C	F	Q	R	C	V	G	M	D	A	F	N	A	V	.	.	F	S	T	T	Y	E	I	D	Q	K	Y	G	T	N	Y	H	K	N	F	T	E	Y	L	K	Y	I	Q	E	N	D	L	I	V	D	G	A
Template Known Secondary structure		G	G	G					S																			S	S				T											.	.																														T
Template Predicted Secondary structure																																												.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		240	.	.	.	.	.	.									.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure									.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.
Query Sequence		L	T	S	P	E	A	G	.	.	.	.	.	.	.	.	S	D	A	G	A	I	P	D	T	G	I	V	C	M	G	E	W	Q	G	Q	Q	V	L	G	M	R	L	T	W	N	K	R	Y	I	T	L	A	P	I	A	T	V	L	G	L	A	F	K	L	S	D	P	E	K	L	L	G	G	A	E	D	L	G	I	T
Query Conservation									.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.																														.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.																														.	.	.	.	.
Template Sequence		M	T	D	P	K	G	D	R	G	L	A	P	S	A	Q	K	D	P	D	L	F	L	R	I	V	E	K	R	E	D	.	.	.	.	.	.	.	.	G	I	V	V	R	G	A	K	A	H	Q	T	G	S	I	N	S	H	E	H	I	I	M	P	T	I	A	M	T	.	.	.	.	.	E	A	D	K	D	Y	A	V
Template Known Secondary structure							S		T	T	S		G	G	G		S	S	T	T	S	S								S	S	.	.	.	.	.	.	.	.										S		T	T		T	T		S							S	S				.	.	.	.	.	G	G	G	G	G	G
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.																														.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.									.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.						.	.	210	.	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.		.	.	.	.	.																340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure																									.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	A	L	I	P	T	T	T	P	G	V	E	I	G	R	R	H	F	P	L	N	V	P	.	F	Q	N	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	G	K	D	V	F	V	P	I	D	Y	I	I
Query Conservation																									.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	F	A	C	P	S	D	A	D	G	L	F	M	I	Y	G	R	Q	S	C	D	T	R	K	M	E	E	G	A	D	I	D	L	G	N	K	Q	F	G	G	Q	E	A	L	V	V	F	D	N	V	F	I	P	N	D	R	I	F
Template Known Secondary structure							T	T		T	T									T	T	G	G	G	G	G	S	T	T			G	G	G	S	S	S	S																	G	G	G
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions