Job Description Q47146 Confidence 100.00% Date Thu Jan 5 12:36:21 GMT 2012 Rank 43 Aligned Residues 223 % Identity 21% Template d1rx0a2 SCOP info Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains Resolution 1.77

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		P	Q	P	R	L	T	A	E	E	Q	A	F	L	D	G	P	V	E	E	A	C	R	.	.	M	A	N	D	F	Q	I	T	H	E	L	A	D	L	P	P	E	L	W	A	Y	L	K	E	H	R	F	F	A	M	I	I	K	K	E	Y	G	G	L	E	F	S	A	Y	A	Q	S	R	V	L	Q	K	L	S	G	V
Query Conservation																								.	.
Alig confidence																	.							.	.
Template Conservation																	.
Template Sequence		P	S	M	G	L	N	E	E	Q	K	E	F	Q	K	V	.	A	F	D	F	A	A	R	E	M	A	P	N	M	A	E	W	D	Q	K	E	L	F	P	V	D	V	M	R	K	A	A	Q	L	G	F	G	G	V	Y	I	Q	T	D	V	G	G	S	G	L	S	R	L	D	T	S	V	I	F	E	A	L	A	T	G
Template Known Secondary structure		T	T	T	T												.									T											T													T	T		S	S	T	T	S		G	G	G	T																		T	T
Template Predicted Secondary structure																	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	I	L	A	I	T	V	G	V	P	N	S	L	G	P	G	E	L	L	Q	H	Y	G	T	D	E	Q	K	D	H	Y	L	P	R	L	A	R	G	Q	E	I	P	C	F	A	L	T	S	P	E	A	G	S	D	A	G	A	I	P	D	T	G	I	V	C	M	G	E	W	Q	G	Q	Q	V	L	G	M	R	L
Query Conservation
Alig confidence															.	.																																																						.	.	.	.	.	.	.	.
Template Conservation															.	.																																																						.	.	.	.	.	.	.	.
Template Sequence		C	T	S	T	T	A	Y	I	S	I	H	N	M	.	.	C	A	W	M	I	D	S	F	G	N	E	E	Q	R	H	K	F	C	P	P	L	C	T	M	E	K	F	A	S	Y	C	L	T	E	P	G	S	G	S	D	A	A	S	L	L	T	S	A	K	K	Q	G	D	.	.	.	.	.	.	.	.	H	Y	I	L
Template Known Secondary structure															.	.									S														T	T	S	S								B	T	T	B	S	S	S	G	G	G									T	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.																																																						.	.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.									160	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		T	W	N	K	R	Y	I	T	L	A	P	I	A	T	V	L	G	L	A	F	K	L	S	D	P	E	K	L	L	G	G	A	E	D	L	G	I	T	C	A	L	I	P	T	T	T	P	G	V	E	I	G	R	R	H	F	P	L	N	V	P	F	.	Q	N	G	P	T	R	G	K	D	V	F	V	P	I	D	Y	I
Query Conservation																																																																.
Alig confidence																										.	.	.	.	.	.	.																																.
Template Conservation																										.	.	.	.	.	.	.
Template Sequence		N	G	S	K	A	F	I	S	G	A	G	E	S	D	I	Y	V	V	M	C	R	T	G	G	.	.	.	.	.	.	.	P	G	P	K	G	I	S	C	I	V	V	E	K	G	T	P	G	L	S	F	G	K	K	E	K	K	V	G	W	N	S	Q	P	T	R	A	V	I	F	E	D	C	A	V	P	V	A	N	R
Template Known Secondary structure										T	T	T	T		S								S	S	S	.	.	.	.	.	.	.	S	S	G	G	G								T	T		T	T										S	S		T	T	S														G	G	G
Template Predicted Secondary structure																										.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.								.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		353	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	G	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	S	E
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions