Job Description Q47146 Confidence 100.00% Date Thu Jan 5 12:36:21 GMT 2012 Rank 46 Aligned Residues 207 % Identity 22% Template d1r2ja2 SCOP info Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains Resolution 2.10

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	Q	A	F	L	D	G	P	V	E	E	A	C	R	M	A	N	D	F	Q	I	T	H	E	L	A	D	L	P	P	E	L	W	A	Y	L	K	E	H	R	F	F	A	M	I	I	K	K	E	Y	G	G	L	E	F	S	A	Y	A	Q	S	R	V	L	Q	K	L	S	G	V	S	G	I	L	A	I	T	V	G
Query Conservation
Alig confidence																				.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.
Template Sequence		E	R	D	A	L	L	T	D	L	V	G	D	R	A	A	E	W	D	.	.	.	.	.	.	T	S	G	E	L	P	R	D	L	L	V	R	L	G	A	D	G	L	L	C	A	E	V	A	A	E	H	G	G	L	G	L	G	S	R	E	N	G	E	F	T	A	H	V	G	S	L	C	S	S	L	R	S	V	M	T
Template Known Secondary structure												S	S							.	.	.	.	.	.			T													T	T	T	T	S	T	T	S		G	G	G	T
Template Predicted Secondary structure																				.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20							.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	N	S	L	G	P	G	E	L	L	Q	H	Y	G	T	D	E	Q	K	D	H	Y	L	P	R	L	A	R	G	Q	E	I	P	C	F	A	L	T	S	P	E	A	G	S	D	A	G	A	I	P	D	T	G	I	V	C	M	G	E	W	Q	G	Q	Q	V	L	G	M	R	L	T	W	N	K	R	Y	I	T	L
Query Conservation
Alig confidence						.	.																									.	.																												.	.	.	.	.	.	.	.
Template Conservation						.	.																									.	.																												.	.	.	.	.	.	.	.
Template Sequence		S	Q	G	M	.	.	A	A	W	T	V	Q	R	L	G	D	A	G	Q	R	A	T	F	L	K	E	L	T	S	G	.	.	L	A	A	V	G	F	S	E	R	Q	A	G	S	D	L	S	A	M	R	T	R	V	R	L	D	G	D	.	.	.	.	.	.	.	.	T	A	V	V	D	G	H	K	V	W	T	T	A
Template Known Secondary structure						.	.									S												T	T			.	.								B	T	T	B	S	S		G	G	G									T	T	.	.	.	.	.	.	.	.												T	T
Template Predicted Secondary structure						.	.																									.	.																												.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.									.	.	.	.	.	.	.	.	140	.	.	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		A	P	I	A	T	V	L	G	L	A	F	K	L	S	D	P	E	K	L	L	G	G	A	E	D	L	G	I	T	C	A	L	I	P	T	T	T	P	G	V	E	I	G	R	R	H	F	P	L	N	V	P	F	Q	.	N	G	P	T	R	G	K	D	V	F	V	P	I	D	Y	I	I	G	G	P	K	M	A	G
Query Conservation																																																								.
Alig confidence																		.	.	.	.	.	.	.	.	.	.																													.																					.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.																																																		.	.	.
Template Sequence		A	A	Y	A	D	H	L	V	V	F	G	L	Q	E	D	G	.	.	.	.	.	.	.	.	.	.	S	G	A	V	V	V	V	P	A	D	T	P	G	V	R	V	E	R	V	P	K	P	S	G	C	R	A	A	G	H	A	D	L	H	L	D	Q	V	R	V	P	A	G	A	V	L	A	G	S	.	.	.	G
Template Known Secondary structure		T	T	T		S							B		S	S	S	.	.	.	.	.	.	.	.	.	.									T	T	S	T	T							S	S		S	S	S	T	T	S														G	G	G	B		T	T	T	.	.	.	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.																																																		.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.											.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210				.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions