Job Description Q47146 Confidence 100.00% Date Thu Jan 5 12:36:21 GMT 2012 Rank 42 Aligned Residues 227 % Identity 23% Template d1jqia2 SCOP info Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains Resolution 2.25

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		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		Y	P	Q	P	R	L	T	A	E	E	Q	A	F	L	D	G	P	V	E	E	A	C	R	.	.	M	A	N	D	F	Q	I	T	H	E	L	A	D	L	P	P	E	L	W	A	Y	L	K	E	H	R	F	F	A	M	I	I	K	K	E	Y	G	G	L	E	F	S	A	Y	A	Q	S	R	V	L	Q	K	L	S	G
Query Conservation																									.	.
Alig confidence																		.							.	.
Template Conservation																		.
Template Sequence		Y	Q	S	V	E	L	P	E	T	H	Q	M	L	R	Q	T	.	C	R	D	F	A	E	K	E	L	V	P	I	A	A	Q	L	D	K	E	H	L	F	P	T	S	Q	V	K	K	M	G	E	L	G	L	L	A	M	D	V	P	E	E	L	S	G	A	G	L	D	Y	L	A	Y	S	I	A	L	E	E	I	S	R
Template Known Secondary structure					S													.									T	T	T	T								T														T	T	T	S	S	S	S		G	G	G	T
Template Predicted Secondary structure																		.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	G	I	L	A	I	T	V	G	V	P	N	S	L	G	P	G	E	L	L	Q	H	Y	G	T	D	E	Q	K	D	H	Y	L	P	R	L	A	R	G	Q	E	I	P	C	F	A	L	T	S	P	E	A	G	S	D	A	G	A	I	P	D	T	G	I	V	C	M	G	E	W	Q	G	Q	Q	V	L	G	M	R
Query Conservation
Alig confidence																		.																																																					.	.	.	.	.	.	.	.
Template Conservation																		.																																																					.	.	.	.	.	.	.	.
Template Sequence		G	C	A	S	T	G	V	I	M	S	V	N	N	S	L	Y	.	L	G	P	I	L	K	F	G	S	S	Q	Q	K	Q	Q	W	I	T	P	F	T	N	G	D	K	I	G	C	F	A	L	S	E	P	G	N	G	S	D	A	G	A	A	S	T	T	A	R	E	E	G	D	.	.	.	.	.	.	.	.	S	W	V
Template Known Secondary structure																T	T	.																	T	G	G	G	S	S	S	S									B	T	T	B	S	S	S	T	T										S	S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.																																																					.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.									.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		L	T	W	N	K	R	Y	I	T	L	A	P	I	A	T	V	L	G	L	A	F	K	L	S	D	P	E	K	L	L	G	G	A	E	D	L	G	I	T	C	A	L	I	P	T	T	T	P	G	V	E	I	G	R	R	H	F	P	L	N	V	P	F	.	Q	N	G	P	T	R	G	K	D	V	F	V	P	I	D	Y
Query Conservation																																																																	.
Alig confidence																											.	.	.	.	.	.																																	.
Template Conservation																											.	.	.	.	.	.
Template Sequence		L	N	G	T	K	A	W	I	T	N	S	W	E	A	S	A	T	V	V	F	A	S	T	D	R	.	.	.	.	.	.	S	R	Q	N	K	G	I	S	A	F	L	V	P	M	P	T	P	G	L	T	L	G	K	K	E	D	K	L	G	I	R	A	S	S	T	A	N	L	I	F	E	D	C	R	I	P	K	E	N
Template Known Secondary structure											T	T	T	T		S								S		G	.	.	.	.	.	.	G	G	G	G	G	S								S	S		T	T										S	S		T	T	S														G	G	G
Template Predicted Secondary structure																											.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.							180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		352	.	.	.	.	.	.	.	360
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	G	G	P	K	M	A	G
Query Conservation
Alig confidence							.	.	.
Template Conservation							.	.	.
Template Sequence		L	L	G	E	P	.	.	.	G
Template Known Secondary structure				S	S		.	.	.
Template Predicted Secondary structure							.	.	.
Template SS confidence
		229	230	.	.	.				.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions