Job Description Q47146 Confidence 100.00% Date Thu Jan 5 12:36:21 GMT 2012 Rank 51 Aligned Residues 228 % Identity 23% Template d1ivha2 SCOP info Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains Resolution 2.60

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		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																										.	.														.	.
Query SS confidence																										.	.														.	.
Query Sequence		P	Q	P	R	L	T	A	E	E	Q	A	F	L	D	G	P	V	E	E	A	C	R	M	A	.	.	N	D	F	Q	I	T	H	E	L	A	D	L	P	.	.	P	E	L	W	A	Y	L	K	E	H	R	F	F	A	M	I	I	K	K	E	Y	G	G	L	E	F	S	A	Y	A	Q	S	R	V	L	Q	K	L	S
Query Conservation																										.	.														.	.
Alig confidence																	.									.	.														.	.
Template Conservation																	.
Template Sequence		A	I	N	G	L	S	E	E	Q	R	Q	L	R	Q	T	.	M	A	K	F	L	Q	E	H	L	A	P	K	A	Q	E	I	D	R	S	N	E	F	K	N	L	R	E	F	W	K	Q	L	G	N	L	G	V	L	G	I	T	A	P	V	Q	Y	G	G	S	G	L	G	Y	L	E	H	V	L	V	M	E	E	I	S
Template Known Secondary structure		G	G	G	T												.									T	T	T	T								T			T	T												T		T	T	T	T	S		G	G	G	T
Template Predicted Secondary structure																	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	S	G	I	L	A	I	T	V	G	V	P	N	S	L	G	P	G	E	L	L	Q	H	Y	G	T	D	E	Q	K	D	H	Y	L	P	R	L	A	R	G	Q	E	I	P	C	F	A	L	T	S	P	E	A	G	S	D	A	G	A	I	P	D	T	G	I	V	C	M	G	E	W	Q	G	Q	Q	V	L	G	M
Query Conservation
Alig confidence																			.																																																					.	.	.	.	.	.	.	.
Template Conservation																			.																																																					.	.	.	.	.	.	.	.
Template Sequence		R	A	S	G	A	V	G	L	S	Y	G	A	H	S	N	L	C	.	I	N	Q	L	V	R	N	G	N	E	A	Q	K	E	K	Y	L	P	K	L	I	S	G	E	Y	I	G	A	L	A	M	S	E	P	N	A	G	S	D	V	V	S	M	K	L	K	A	E	K	K	G	N	.	.	.	.	.	.	.	.	H	Y
Template Known Secondary structure																T	T	T	.																							T	S	S								B	T	T	B	S	S	S	G	G	G									S	S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.																																																					.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.									.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		R	L	T	W	N	K	R	Y	I	T	L	A	P	I	A	T	V	L	G	L	A	F	K	L	S	D	P	E	K	L	L	G	G	A	E	D	L	G	I	T	C	A	L	I	P	T	T	T	P	G	V	E	I	G	R	R	H	F	P	L	N	V	P	F	.	Q	N	G	P	T	R	G	K	D	V	F	V	P	I	D
Query Conservation																																																																		.
Alig confidence																													.	.	.	.																																		.
Template Conservation																													.	.	.	.
Template Sequence		I	L	N	G	N	K	F	W	I	T	N	G	P	D	A	D	V	L	I	V	Y	A	K	T	D	L	A	.	.	.	.	A	V	P	A	S	R	G	I	T	A	F	I	V	E	K	G	M	P	G	F	S	T	S	K	K	L	D	K	L	G	M	R	G	S	N	T	C	E	L	I	F	E	D	C	K	I	P	A	A
Template Known Secondary structure												T	G	G	G		S								S		T	T	.	.	.	.		S	S	G	G	G	G								T	T		T	T										S	S		T	T	S														G	G
Template Predicted Secondary structure																													.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		351	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	I	G	G	P	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	I	L	G	H	E	N
Template Known Secondary structure		G			S
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions