Job Description Q47146 Confidence 100.00% Date Thu Jan 5 12:36:21 GMT 2012 Rank 50 Aligned Residues 223 % Identity 24% Template d1buca2 SCOP info Acyl-CoA dehydrogenase NM domain-like Acyl-CoA dehydrogenase NM domain-like Medium chain acyl-CoA dehydrogenase, NM (N-terminal and middle) domains Resolution 2.50

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		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.				.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																					.	.																																									.	.	.
Query SS confidence																					.	.																																									.	.	.
Query Sequence		R	L	T	A	E	E	Q	A	F	L	D	G	P	V	E	E	A	C	R	.	.	M	A	N	D	F	Q	I	T	H	E	L	A	D	L	P	P	E	L	W	A	Y	L	K	E	H	R	F	F	A	M	I	I	K	K	E	Y	G	G	L	E	.	.	.	F	S	A	Y	A	Q	S	R	V	L	Q	K	L	S	G	V
Query Conservation																					.	.																																									.	.	.
Alig confidence														.							.	.																																									.	.	.
Template Conservation														.
Template Sequence		N	L	T	D	I	Q	Q	D	F	L	K	L	.	A	H	D	F	G	E	K	K	L	A	P	T	V	T	E	R	D	H	K	G	I	Y	D	K	E	L	I	D	E	L	L	S	L	G	I	T	G	A	Y	F	E	E	K	Y	G	G	S	G	D	D	G	G	D	V	L	S	Y	I	L	A	V	E	E	L	A	K	Y
Template Known Secondary structure														.								T	T	T	T	T								T												T	T	S	G	G	G	T	T	S		G	G	G	T		G	G	G	G	T
Template Predicted Secondary structure														.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	I	L	A	I	T	V	G	V	P	N	S	L	G	P	G	E	L	L	Q	H	Y	G	T	D	E	Q	K	D	H	Y	L	P	R	L	A	R	G	Q	E	I	P	C	F	A	L	T	S	P	E	A	G	S	D	A	G	A	I	P	D	T	G	I	V	C	M	G	E	W	Q	G	Q	Q	V	L	G	M	R	L
Query Conservation
Alig confidence																.																																																							.	.	.	.	.	.	.
Template Conservation																.																																																							.	.	.	.	.	.	.
Template Sequence		D	A	G	V	A	I	T	L	S	A	T	V	S	L	.	C	A	N	P	I	W	Q	F	G	T	E	A	Q	K	E	K	F	L	V	P	L	V	E	G	T	K	L	G	A	F	G	L	T	E	P	N	A	G	T	D	A	S	G	Q	Q	T	I	A	T	K	N	D	D	G	.	.	.	.	.	.	.	T	Y	T	L
Template Known Secondary structure																.	T																T							T	S	S								B	T	T	B	S	S		G	G	G									T	T	S	.	.	.	.	.	.	.
Template Predicted Secondary structure																.																																																							.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150								.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		T	W	N	K	R	Y	I	T	L	A	P	I	A	T	V	L	G	L	A	F	K	L	S	D	P	E	K	L	L	G	G	A	E	D	L	G	I	T	C	A	L	I	P	T	T	T	P	G	V	E	I	G	R	R	H	F	P	L	N	V	P	F	.	Q	N	G	P	T	R	G	K	D	V	F	V	P	I	D	Y	I
Query Conservation																																																																.
Alig confidence																										.	.	.	.	.	.																																	.
Template Conservation																										.	.	.	.	.	.
Template Sequence		N	G	S	K	I	F	I	T	N	G	G	A	A	D	I	Y	I	V	F	A	M	T	D	K	.	.	.	.	.	.	S	K	G	N	H	G	I	T	A	F	I	L	E	D	G	T	P	G	F	T	Y	G	K	K	E	D	K	M	G	I	H	T	S	Q	T	M	E	L	V	F	Q	D	V	K	V	P	A	E	N	M
Template Known Secondary structure										T	T	T	T		S								S		S	.	.	.	.	.	.	S	S	S	T	T	S								T	T		T	T										S	S		T	T	S														G	G	G
Template Predicted Secondary structure																										.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.							.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		353	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	G	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	E	E
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions