Job Description Q47146 Confidence 100.00% Date Thu Jan 5 12:36:21 GMT 2012 Rank 6 Aligned Residues 378 % Identity 26% Template c3sf6A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glutaryl-coa dehydrogenase; PDBTitle: crystal structure of glutaryl-coa dehydrogenase from mycobacterium2 smegmatis Resolution 1.70 Å

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		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure																																			.	.																.
Query SS confidence																																			.	.																.
Query Sequence		G	K	P	D	W	K	K	L	H	N	Y	P	Q	P	R	L	T	A	E	E	Q	A	F	L	D	G	P	V	E	E	A	C	R	.	.	M	A	N	D	F	Q	I	T	H	E	L	A	D	L	P	.	P	E	L	W	A	Y	L	K	E	H	R	F	F	A	M	I	I	K	K	E	Y	G	G	L	E	F	S	A	Y
Query Conservation																																			.	.																.
Alig confidence										.	.	.	.															.							.	.																.																			.
Template Conservation										.	.	.	.															.																																											.
Template Sequence		G	A	D	D	L	I	G	I	.	.	.	.	N	A	V	L	S	A	E	E	R	E	I	R	D	T	.	V	R	S	V	V	Q	R	R	I	K	P	H	I	A	S	W	Y	E	D	G	E	L	P	A	R	E	L	A	V	E	L	G	E	L	G	L	L	G	M	H	L	K	.	G	Y	G	C	A	G	M	S	A	V
Template Known Secondary structure								T		.	.	.	.	G	G	G	S											.									T	T	T	T								T														T	T		S	S	T	T	S		.	S	T	T
Template Predicted Secondary structure										.	.	.	.															.																																											.
Template SS confidence
		15	.	.	.	.	20	.	.					.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	S	R	V	L	Q	K	L	S	G	V	S	G	I	L	A	I	T	V	G	V	P	N	S	L	G	P	G	E	L	L	Q	H	Y	G	T	D	E	Q	K	D	H	Y	L	P	R	L	A	R	G	Q	E	I	P	C	F	A	L	T	S	P	E	A	G	S	D	A	G	A	I	P	D	T	G	I	V	C	M	G
Query Conservation
Alig confidence																													.
Template Conservation																													.
Template Sequence		A	Y	G	L	A	C	L	E	L	E	A	G	D	S	G	I	R	S	L	V	S	V	Q	G	S	L	A	.	M	Y	A	I	H	A	F	G	S	D	E	Q	K	D	Q	W	L	P	D	M	A	S	G	H	R	I	G	C	F	G	L	T	E	P	D	H	G	S	D	P	A	G	M	R	T	R	A	T	R	S	G	D
Template Known Secondary structure																											T		.																						T	T	S	S								B	T	T	B	S	S		G	G	G									T	T
Template Predicted Secondary structure																													.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		E	W	Q	G	Q	Q	V	L	G	M	R	L	T	W	N	K	R	Y	I	T	L	A	P	I	A	T	V	L	G	L	A	F	K	L	S	D	P	E	K	L	L	G	G	A	E	D	L	G	I	T	C	A	L	I	P	T	T	T	P	G	V	E	I	G	R	R	H	F	P	L	N	V	P	F	Q	.	N	G	P	T
Query Conservation																																																																													.
Alig confidence		.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.																													.
Template Conservation		.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	D	W	I	L	T	G	T	K	M	W	I	T	N	G	S	V	A	D	V	A	V	V	W	A	R	T	D	E	.	.	.	.	.	.	.	.	.	.	.	G	I	R	G	F	V	V	P	T	D	T	P	G	F	T	A	N	T	I	K	S	K	M	S	L	R	A	S	V	T	S	E	L
Template Known Secondary structure		.	.	.	.	.	.	.	.													T	G	G	G		S									T	T	.	.	.	.	.	.	.	.	.	.	.									T	T	S	T	T								S		S	S		T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
										168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.												.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	K	D	V	F	V	P	I	D	Y	I	I	G	G	P	K	M	A	G	Q	G	W	R	M	L	V	E	C	L	S	V	G	R	G	I	T	L	P	S	N	S	T	G	G	V	K	S	V	A	L	A	T	G	A	Y	A	H	I	R	R	Q	F	K	I	S	I	G	K	M	E	G	I	E	E	P	L	A	R	I
Query Conservation
Alig confidence																	.	.	.	.																.
Template Conservation																	.	.	.	.																.
Template Sequence		V	L	D	G	V	R	L	P	D	S	A	R	L	P	G	.	.	.	.	A	T	S	L	G	A	P	L	R	C	L	N	E	A	R	.	F	G	I	V	F	G	A	L	G	A	A	R	D	C	L	E	T	A	L	A	Y	A	C	S	R	E	Q	F	D	R	P	I	G	G	F	Q	L	T	Q	Q	K	L	A	D	M
Template Known Secondary structure										G	G	G	B		T	T	.	.	.	.			S	T												.																												T	T			G	G	G	S
Template Predicted Secondary structure																	.	.	.	.																.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.					.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	N	A	Y	V	M	D	A	A	A	S	L	I	T	Y	G	I	M	L	G	E	K	P	A	V	L	S	A	I	V	K	Y	H	C	T	H	R	G	Q	Q	S	I	I	D	A	M	D	I	T	G	G	K	G	I	M	L	G	Q	S	N	F	L	A	R	A	Y	Q	G	A	P	I	A	I	T	V	E	G	A	N
Query Conservation
Alig confidence																																																											.	.
Template Conservation																																																											.	.
Template Sequence		T	L	E	Y	G	K	G	F	L	L	A	L	H	L	G	R	Q	K	D	A	G	E	L	A	P	E	Q	V	S	L	G	K	L	N	N	V	R	E	A	I	E	I	A	R	T	A	R	T	V	L	G	A	S	G	I	T	G	.	.	E	Y	P	V	M	R	H	A	N	N	L	E	S	V	L	T	Y	E	G	T	S
Template Known Secondary structure																						T																														G	G	G	G	G	S	T	.	.	T	S	S														S	S	S
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360			.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		501	.	.	.	.	.	.				.	.	510	.	.	.	.	.
Predicted Secondary structure									.	.	.
Query SS confidence									.	.	.
Query Sequence		I	L	T	R	S	M	M	.	.	.	I	F	G	Q	G	A	I	R
Query Conservation									.	.	.
Alig confidence									.	.	.
Template Conservation
Template Sequence		E	M	H	T	L	I	I	G	Q	A	L	T	G	V	G	A	F	R
Template Known Secondary structure														S
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.