Job Description Q47146 Confidence 100.00% Date Thu Jan 5 12:36:21 GMT 2012 Rank 14 Aligned Residues 370 % Identity 18% Template c3r7kB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:probable acyl coa dehydrogenase; PDBTitle: crystal structure of a probable acyl coa dehydrogenase from2 mycobacterium abscessus atcc 19977 / dsm 44196 Resolution 2.50 Å

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		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		P	Q	P	R	L	T	A	E	E	Q	A	F	L	D	G	P	V	E	E	A	C	R	M	A	N	.	.	D	F	Q	I	T	H	E	L	A	D	L	P	P	E	L	W	A	Y	L	K	E	H	R	F	F	A	M	I	I	K	K	E	Y	G	G	L	E	F	S	A	Y	A	Q	S	R	V	L	Q	K	L	S	G	V
Query Conservation																											.	.
Alig confidence																	.										.	.
Template Conservation																	.
Template Sequence		P	E	A	W	T	T	P	E	R	R	A	L	S	Q	M	.	A	R	S	F	V	E	R	E	I	A	P	K	L	A	E	W	E	H	V	G	E	I	P	R	D	L	H	L	N	A	A	E	V	G	L	L	G	I	G	F	P	E	E	V	G	G	S	G	G	N	A	I	D	S	A	L	V	T	E	A	I	L	A	A
Template Known Secondary structure					T	T											.									T											T	S			T										T		T	T	T	T	S		G	G	G	T	S																		T
Template Predicted Secondary structure																	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	I	L	A	I	T	V	G	V	P	N	S	L	G	P	G	E	L	L	Q	H	Y	G	T	D	E	Q	K	D	H	Y	L	P	R	L	A	R	G	Q	E	I	P	C	F	A	L	T	S	P	E	A	G	S	D	A	G	A	I	P	D	T	G	I	V	C	M	G	E	W	Q	G	Q	Q	V	L	G	M	R	L
Query Conservation
Alig confidence																																																																						.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.
Template Sequence		G	G	S	T	G	V	C	A	A	L	F	T	H	G	I	A	L	P	H	I	A	A	N	G	S	D	A	L	I	E	R	Y	V	R	P	T	L	A	G	K	M	I	G	S	L	G	V	T	E	P	G	A	G	S	D	V	A	N	L	R	T	R	A	V	R	E	G	D	.	.	.	.	.	.	.	.	T	Y	V	V
Template Known Secondary structure		T										T	T					S															T						T	T	S									B	T	T	B	S	S		G	G	G									T	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.									.	.	170	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		T	W	N	K	R	Y	I	T	L	A	P	I	A	T	V	L	G	L	A	F	K	L	S	D	P	E	K	L	L	G	G	A	E	D	L	G	I	T	C	A	L	I	P	T	T	T	P	G	V	E	I	G	R	R	H	F	P	L	N	V	P	F	Q	.	N	G	P	T	R	G	K	D	V	F	V	P	I	D	Y	I
Query Conservation																																																																	.
Alig confidence																										.	.	.	.	.	.	.																																	.
Template Conservation																										.	.	.	.	.	.	.
Template Sequence		N	G	A	K	T	F	I	T	S	G	V	R	A	D	F	V	T	T	A	V	R	T	G	G	.	.	.	.	.	.	.	P	G	Y	G	G	V	S	L	L	V	I	D	K	N	S	P	G	F	E	V	S	R	R	L	D	K	M	G	W	R	C	S	D	T	A	E	L	S	F	V	D	V	R	V	P	A	D	N	L
Template Known Secondary structure										T	T	T	T		S									S	S	.	.	.	.	.	.	.	S	S	G	G	G								T	T	S	T	T										S	S		T	T	S														G	G	G	B
Template Predicted Secondary structure																										.	.	.	.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.								.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	G	P	K	M	A	G	Q	G	W	R	M	L	V	E	C	L	S	V	G	R	G	I	T	L	P	S	N	S	T	G	G	V	K	S	V	A	L	A	T	G	A	Y	A	H	I	R	R	Q	F	K	I	S	I	G	K	M	E	G	I	E	E	P	L	A	R	I	A	G	N	A	Y	V	M	D	A	A	A	S
Query Conservation
Alig confidence						.	.	.																.
Template Conservation						.	.	.																.
Template Sequence		V	G	A	E	.	.	.	N	S	G	F	L	Q	I	M	Q	Q	F	Q	A	E	R	.	L	G	I	A	V	Q	A	Y	A	T	A	G	R	A	L	D	L	A	K	S	W	A	R	E	R	E	T	F	G	R	P	L	T	G	R	Q	I	I	R	H	K	L	A	E	M	A	R	Q	V	D	V	A	C	T	Y	T	R
Template Known Secondary structure			S	S	T	.	.	.	T															.																												T	T			G	G	G	S
Template Predicted Secondary structure						.	.	.																.
Template SS confidence
		245	.	.	.				.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	T	Y	G	I	M	L	G	E	K	P	A	V	L	S	A	I	V	K	Y	H	C	T	H	R	G	Q	Q	S	I	I	D	A	M	D	I	T	G	G	K	G	I	M	L	G	Q	S	N	F	L	A	R	A	Y	Q	G	A	P	I	A	I	T	V	E	G	A	N	I	L	T	R	S	M	M
Query Conservation
Alig confidence																																															.	.
Template Conservation																																															.	.
Template Sequence		A	V	M	Q	R	W	L	A	G	E	D	V	V	A	E	V	S	M	A	K	N	T	A	V	Y	A	C	D	Y	V	V	N	E	A	V	Q	I	F	G	G	M	G	Y	M	R	.	.	E	S	E	I	E	R	H	Y	R	D	C	R	I	L	G	I	G	G	G	T	N	E	I	M	N	E	V	I
Template Known Secondary structure										T																														G	G	G	G	G	S	T	.	.	T	S										T	T	T	T	T	T	T	S
Template Predicted Secondary structure																																															.	.
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.			.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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