Job Description Q47146 Confidence 100.00% Date Thu Jan 5 12:36:21 GMT 2012 Rank 31 Aligned Residues 366 % Identity 24% Template c3pfdB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of an acyl-coa dehydrogenase from mycobacterium2 thermoresistibile bound to reduced flavin adenine dinucleotide solved3 by combined iodide ion sad mr Resolution 2.10 Å

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		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		E	E	Q	A	F	L	D	G	P	V	E	E	A	C	R	M	A	N	D	F	.	Q	I	T	H	E	L	A	D	L	P	P	E	L	W	A	Y	L	K	E	H	R	F	F	A	M	I	I	K	K	E	Y	G	G	L	E	F	S	A	Y	A	Q	S	R	V	L	Q	K	L	S	G	V	S	G	I	L	A	I	T	V
Query Conservation																						.
Alig confidence																						.
Template Conservation
Template Sequence		E	H	I	A	L	R	E	A	I	R	A	L	A	E	K	E	I	A	P	Y	A	A	E	V	D	E	K	A	R	F	P	E	E	A	L	A	A	L	N	S	S	G	F	S	A	I	H	V	P	E	E	Y	G	G	Q	G	A	D	S	V	A	T	C	I	V	I	E	E	V	A	R	V	D	C	S	A	S	L	I	P
Template Known Secondary structure																		T	G	G	G							T	T														T		S		T	T	S		G	G	G	T																		T	T
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	P	N	S	L	G	P	G	E	L	L	Q	H	Y	G	T	D	E	Q	K	D	H	Y	L	P	R	L	A	R	G	Q	E	I	P	C	F	A	L	T	S	P	E	A	G	S	D	A	G	A	I	P	D	T	G	I	V	C	M	G	E	W	Q	G	Q	Q	V	L	G	M	R	L	T	W	N	K	R	Y	I	T
Query Conservation
Alig confidence							.	.																																																						.	.	.	.	.	.	.	.
Template Conservation							.	.																																																						.	.	.	.	.	.	.	.
Template Sequence		A	V	N	K	L	.	.	G	T	M	G	L	I	L	R	G	S	E	E	L	K	K	Q	V	L	P	A	V	A	S	G	E	A	M	A	S	Y	A	L	S	E	R	E	A	G	S	D	A	A	S	M	R	T	R	A	V	A	D	G	D	.	.	.	.	.	.	.	.	D	W	I	L	N	G	S	K	C	W	I	T
Template Known Secondary structure							.	.	T	T																						T	S									B	T	T	B	S	S	S	G	G	G									T	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.																																																						.	.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.									.	.	.	.	160	.	.	.	.	.	.	.
		282	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.		.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		L	A	P	I	A	T	V	L	G	L	A	F	K	L	S	D	P	E	K	L	L	G	G	A	E	D	L	G	I	T	C	A	L	I	P	T	T	T	P	G	V	E	I	G	R	R	H	F	P	L	N	V	P	F	.	Q	N	G	P	T	R	G	K	D	V	F	V	P	I	D	Y	I	I	G	G	P	K	M	A	G
Query Conservation																																																								.
Alig confidence																		.	.	.	.	.	.																																	.																						.	.	.
Template Conservation																		.	.	.	.	.	.																																																							.	.	.
Template Sequence		N	G	G	K	S	T	W	Y	T	V	M	A	V	T	D	P	.	.	.	.	.	.	D	K	G	A	N	G	I	S	A	F	M	V	H	K	D	D	E	G	F	T	V	G	P	K	E	R	K	L	G	I	K	G	S	P	T	T	E	L	Y	F	E	N	C	R	I	P	G	D	R	I	I	G	E	P	.	.	.	G
Template Known Secondary structure		T	T	T	T		S								S		G	.	.	.	.	.	.	G	G	G	G	G	G								T	T		T	T										S	S		T	T	S														G	G	G			S	S	T	.	.	.	T
Template Predicted Secondary structure																		.	.	.	.	.	.																																																							.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.							.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.				.
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	W	R	M	L	V	E	C	L	S	V	G	R	G	I	T	L	P	S	N	S	T	G	G	V	K	S	V	A	L	A	T	G	A	Y	A	H	I	R	R	Q	F	K	I	S	I	G	K	M	E	G	I	E	E	P	L	A	R	I	A	G	N	A	Y	V	M	D	A	A	A	S	L	I	T	Y	G	I	M	L
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		T	G	F	K	T	A	L	A	T	L	D	H	T	R	.	P	T	I	G	A	Q	A	V	G	I	A	Q	G	A	L	D	A	A	I	A	Y	T	K	E	R	K	Q	F	G	R	P	V	S	D	N	Q	G	V	Q	F	M	L	A	D	M	A	M	K	I	E	A	A	R	L	M	V	Y	S	A	A	A	R	A	E	R
Template Known Secondary structure													T	T		.																												T	T			G	G	G	S
Template Predicted Secondary structure																.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	K	P	A	V	L	S	A	I	V	K	Y	H	C	T	H	R	G	Q	Q	S	I	I	D	A	M	D	I	T	G	G	K	G	I	M	L	G	Q	S	N	F	L	A	R	A	Y	Q	G	A	P	I	A	I	T	V	E	G	A	N	I	L	T	R	S	M	M	I	F	G	Q	G	A	I	R
Query Conservation
Alig confidence			.	.	.																																		.	.																													.	.
Template Conservation			.	.	.																																		.	.																													.	.
Template Sequence		G	.	.	.	G	F	I	S	A	A	S	K	C	F	A	S	D	V	A	M	E	V	T	T	D	A	V	Q	L	F	G	G	Y	G	Y	T	Q	.	.	D	F	P	V	E	R	M	M	R	D	A	K	I	T	Q	I	Y	E	G	T	N	Q	I	Q	R	V	V	M	.	.	S	R	A	L	L	R
Template Known Secondary structure			.	.	.																										T	G	G	G	G	G	S	T	.	.	T	S	S												T	T	S	S	S										.	.
Template Predicted Secondary structure			.	.	.																																		.	.																													.	.
Template SS confidence
		318				.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.			.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.			380	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions