Job Description Q47146 Confidence 100.00% Date Thu Jan 5 12:36:21 GMT 2012 Rank 10 Aligned Residues 366 % Identity 19% Template c3oibB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:acyl-coa dehydrogenase; PDBTitle: crystal structure of a putative acyl-coa dehydrogenase from2 mycobacterium smegmatis, iodide soak Resolution 2.10 Å

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		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		L	T	A	E	E	Q	A	F	L	D	G	P	V	E	E	A	C	R	M	.	.	A	N	D	F	Q	I	T	H	E	L	A	D	L	P	P	E	L	W	A	Y	L	K	E	H	R	F	F	A	M	I	I	K	K	E	Y	G	G	L	E	F	S	A	Y	A	Q	S	R	V	L	Q	K	L	S	G	V	S	G	I	L
Query Conservation																					.	.
Alig confidence													.								.	.
Template Conservation													.
Template Sequence		T	T	A	E	R	E	A	L	R	K	T	.	V	R	A	F	A	E	R	E	V	L	P	H	A	H	E	W	E	R	A	G	E	I	P	R	E	L	H	R	K	A	A	E	L	G	L	L	G	A	G	F	P	E	D	A	G	G	S	G	G	D	G	A	D	P	V	V	I	C	E	E	M	H	Y	A	G	S	P	G
Template Known Secondary structure		S	S										.									T	G	G	G								T	S												T	T		T	T	B	T	S		G	G	G	T			B			T													T	T
Template Predicted Secondary structure													.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	T	V	G	V	P	N	S	L	G	P	G	E	L	L	Q	H	Y	G	T	D	E	Q	K	D	H	Y	L	P	R	L	A	R	G	Q	E	I	P	C	F	A	L	T	S	P	E	A	G	S	D	A	G	A	I	P	D	T	G	I	V	C	M	G	E	W	Q	G	Q	Q	V	L	G	M	R	L	T	W	N	K
Query Conservation
Alig confidence																																																																		.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.
Template Sequence		G	V	Y	A	S	L	F	T	C	G	I	A	V	P	H	M	I	A	S	G	D	Q	R	L	I	D	T	Y	V	R	P	T	L	R	G	E	K	I	G	A	L	A	I	T	E	P	G	G	G	S	D	V	G	H	L	R	T	R	A	D	L	D	G	D	.	.	.	.	.	.	.	.	H	Y	V	I	N	G	A	K
Template Known Secondary structure								S	T					S							T								T						T	T	S									B	T	T	B	S	S		G	G	G									T	T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.									.	170	.	.	.	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.		.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		R	Y	I	T	L	A	P	I	A	T	V	L	G	L	A	F	K	L	S	D	P	E	K	L	L	G	G	A	E	D	L	G	I	T	C	A	L	I	P	T	T	T	P	G	V	E	I	G	R	R	H	F	P	L	N	V	P	F	Q	.	N	G	P	T	R	G	K	D	V	F	V	P	I	D	Y	I	I	G	G	P
Query Conservation																																																													.
Alig confidence																						.	.	.	.	.	.	.																																	.
Template Conservation																						.	.	.	.	.	.	.
Template Sequence		T	Y	I	T	S	G	V	R	A	D	Y	V	V	T	A	A	R	T	G	G	.	.	.	.	.	.	.	P	G	A	G	G	V	S	L	I	V	V	D	K	G	T	P	G	F	E	V	T	R	K	L	D	K	M	G	W	R	S	S	D	T	A	E	L	S	Y	T	D	V	R	V	P	V	A	N	L	V	G	S	E
Template Known Secondary structure						T	T	T	T		S									S	S	.	.	.	.	.	.	.	S	S	G	G	G								T	T		T	T										S	S		T	T	S														G	G	G			S	S	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.								.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	M	A	G	Q	G	W	R	M	L	V	E	C	L	S	V	G	R	G	I	T	L	P	S	N	S	T	G	G	V	K	S	V	A	L	A	T	G	A	Y	A	H	I	R	R	Q	F	K	I	S	I	G	K	M	E	G	I	E	E	P	L	A	R	I	A	G	N	A	Y	V	M	D	A	A	A	S	L	I	T	Y
Query Conservation
Alig confidence		.	.	.																.
Template Conservation		.	.	.																.
Template Sequence		.	.	.	N	T	G	F	A	Q	I	A	A	A	F	V	A	E	R	.	V	G	L	A	T	Q	A	Y	A	G	A	Q	R	C	L	D	L	T	V	E	W	C	R	N	R	D	T	F	G	R	P	L	I	S	R	Q	A	V	Q	N	T	L	A	G	M	A	R	R	I	D	V	A	R	V	Y	T	R	H	V	V	E
Template Known Secondary structure		.	.	.	T															.																												T	T			G	G	G	S
Template Predicted Secondary structure		.	.	.																.
Template SS confidence
					250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		437	.	.	440	.	.	.	.	.	.	.		.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		G	I	M	L	G	E	K	P	A	V	L	.	S	A	I	V	K	Y	H	C	T	H	R	G	Q	Q	S	I	I	D	A	M	D	I	T	G	G	K	G	I	M	L	G	Q	S	N	F	L	A	R	A	Y	Q	G	A	P	I	A	I	T	V	E	G	A	N	I	L	T	R	S	M	M
Query Conservation													.
Alig confidence													.																															.	.
Template Conservation																																												.	.
Template Sequence		R	Q	L	A	G	E	T	N	L	I	A	E	V	C	F	A	K	N	T	A	V	E	A	G	E	W	V	A	N	Q	A	V	Q	L	F	G	G	M	G	Y	M	A	.	.	E	S	E	V	E	R	Q	Y	R	D	M	R	I	L	G	I	G	G	G	T	T	E	I	L	T	S	L	A
Template Known Secondary structure					T	T																															G	G	G	G	G	S	T	.	.	T	S										T	T	T	T	T	T	T	S
Template Predicted Secondary structure																																												.	.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.			.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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